Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_E07
         (623 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2195|AAF55305.1|   60|Drosophila melanogaster CG17931-P...    50   2e-06
AE014297-2194|AAN13706.2|  118|Drosophila melanogaster CG17931-P...    46   4e-05
BT023278-1|AAY55694.1|  149|Drosophila melanogaster IP10074p pro...    31   1.7  
BT011191-1|AAR88552.1|  391|Drosophila melanogaster LP08442p pro...    29   5.1  
AE014298-643|AAF45958.1|  630|Drosophila melanogaster CG3546-PA ...    29   5.1  
AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA...    29   6.8  

>AE014297-2195|AAF55305.1|   60|Drosophila melanogaster CG17931-PA,
           isoform A protein.
          Length = 60

 Score = 50.4 bits (115), Expect = 2e-06
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = +2

Query: 245 MTRGNQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHRDA 373
           MTRGNQRDLAR KNQKKQ ++ K K       L++++RK RDA
Sbjct: 1   MTRGNQRDLARQKNQKKQADLTKGKRTD---NLTVEQRKARDA 40


>AE014297-2194|AAN13706.2|  118|Drosophila melanogaster CG17931-PB,
           isoform B protein.
          Length = 118

 Score = 46.0 bits (104), Expect = 4e-05
 Identities = 23/43 (53%), Positives = 29/43 (67%)
 Frame = +2

Query: 245 MTRGNQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHRDA 373
           M  GNQRDLAR KNQKKQ ++ K K       L++++RK RDA
Sbjct: 59  MVSGNQRDLARQKNQKKQADLTKGKRTD---NLTVEQRKARDA 98


>BT023278-1|AAY55694.1|  149|Drosophila melanogaster IP10074p
           protein.
          Length = 149

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = +3

Query: 6   GRWFLVMASWLTTVCGLCVVYANYC*KFFFQFYSYW*NGGRC 131
           GRWF+ +  W  ++C  C  Y       +F   SY+    RC
Sbjct: 96  GRWFIYLTDWGFSLCFYCCTYGAIIATIYFIKPSYFAIARRC 137


>BT011191-1|AAR88552.1|  391|Drosophila melanogaster LP08442p
           protein.
          Length = 391

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 257 NQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHR 367
           N+R   + KN+K Q + QK+KN +++     Q++K R
Sbjct: 319 NKRPNQKNKNKKNQKQKQKQKNKNQQQKNKRQQQKKR 355


>AE014298-643|AAF45958.1|  630|Drosophila melanogaster CG3546-PA
           protein.
          Length = 630

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 257 NQRDLARAKNQKKQVEMQKKKNASEKTGLSLQERKHR 367
           N+R   + KN+K Q + QK+KN +++     Q++K R
Sbjct: 307 NKRPNQKNKNKKNQKQKQKQKNKNQQQKNKRQQQKKR 343


>AE014134-1591|AAF52734.1|  275|Drosophila melanogaster CG9555-PA
           protein.
          Length = 275

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 6   GRWFLVMASWLTTVCGLCVVYANYC*KFFFQFYSYW 113
           GRWF+ +  W  ++C  C  Y       +F   SY+
Sbjct: 72  GRWFIYLTDWGFSLCFYCCTYGAIIATIYFIKPSYF 107


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,724,712
Number of Sequences: 53049
Number of extensions: 402359
Number of successful extensions: 868
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 868
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2579793750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)