Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_E06
(733 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 23 3.0
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 3.0
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 3.0
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 3.0
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 23 3.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 6.8
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 6.8
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 6.8
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 9.0
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 9.0
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 9.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 9.0
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 23.0 bits (47), Expect = 3.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 611 KLLQIISPWLFVIGHSR 661
K + I PW++ I H R
Sbjct: 326 KTVSCIDPWIYAINHPR 342
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 23.0 bits (47), Expect = 3.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -2
Query: 333 WLNLLYLVFGHVKRNYSLGQLHAHIF 256
WL L + + K +YSL A+IF
Sbjct: 7 WLILYFSIVCQAKAHYSLRDFKANIF 32
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 375 KGLG**RCNHITTCWLNLLYLV 310
KG+G C + +CW N+ Y++
Sbjct: 98 KGIGYATC--VLSCWTNIYYII 117
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/22 (36%), Positives = 14/22 (63%)
Frame = -2
Query: 375 KGLG**RCNHITTCWLNLLYLV 310
KG+G C + +CW N+ Y++
Sbjct: 151 KGIGYATC--VLSCWTNIYYII 170
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 23.0 bits (47), Expect = 3.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 611 KLLQIISPWLFVIGHSR 661
K + I PW++ I H R
Sbjct: 326 KTVSCIDPWIYAINHPR 342
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.8 bits (44), Expect = 6.8
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 241 YPTLGEYMGMELSQAVIALNMPEYQ---IQQVQPTSSNVVAPLSS 366
YPT+ G+ Q I N P Y+ I+++ S + A + S
Sbjct: 296 YPTMTYSNGLPFPQRPIWSNFPIYKYKYIREIMNKESRISAAIDS 340
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.8 bits (44), Expect = 6.8
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +1
Query: 241 YPTLGEYMGMELSQAVIALNMPEYQ---IQQVQPTSSNVVAPLSS 366
YPT+ G+ Q I N P Y+ I+++ S + A + S
Sbjct: 296 YPTMTYSNGLPFPQRPIWSNFPIYKYKYIREIMNKESRISAAIDS 340
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 6.8
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = -2
Query: 345 ITTCWLNLLYLV 310
+ +CW+N+ Y+V
Sbjct: 68 VMSCWMNVYYIV 79
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 318 YLVFGHVKRNYSLGQLH 268
YL GHV+ Y+ Q H
Sbjct: 785 YLCAGHVRLPYTFEQFH 801
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -2
Query: 318 YLVFGHVKRNYSLGQLH 268
YL GHV+ Y+ Q H
Sbjct: 823 YLCAGHVRLPYTFEQFH 839
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 280 QAVIALNMPEYQIQQVQ 330
Q IA P Y++QQV+
Sbjct: 281 QTAIAFRTPTYRMQQVE 297
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +1
Query: 280 QAVIALNMPEYQIQQVQ 330
Q IA P Y++QQV+
Sbjct: 281 QTAIAFRTPTYRMQQVE 297
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,876
Number of Sequences: 438
Number of extensions: 4624
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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