Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_E04
         (399 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    24   0.64 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   1.1  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   1.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   3.4  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    21   3.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   5.9  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.8 bits (49), Expect = 0.64
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 99  ASTTEYGCPENAHWTDDPCVRTCDDPYLTNTAC 197
           A+ TEY     A    DP V +C   + ++T C
Sbjct: 116 ATATEYKYSAAAPGPSDPSVSSCHQGFSSSTWC 148


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +3

Query: 87  MALEASTTEYGCPENAHWT--DDPCVRTCDDP 176
           + LE +  EYGCP    +   D      C+DP
Sbjct: 183 ICLEGTAREYGCPIGTVFKIGDADGTGNCEDP 214


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = +3

Query: 87  MALEASTTEYGCPENAHWT--DDPCVRTCDDP 176
           + LE +  EYGCP    +   D      C+DP
Sbjct: 183 ICLEGTAREYGCPIGTVFKIGDADGTGNCEDP 214


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 129  NAHWTDDPCVRTCDDPYLTNT 191
            N +W +DP VR  +  +L++T
Sbjct: 1211 NPYWIEDPDVRKGEVEFLSST 1231


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 129  NAHWTDDPCVRTCDDPYLTNT 191
            N +W +DP VR  +  +L++T
Sbjct: 1211 NPYWIEDPDVRKGEVEFLSST 1231


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 129  NAHWTDDPCVRTCDDPYLTNT 191
            N +W +DP VR  +  +L++T
Sbjct: 1211 NPYWIEDPDVRKGEVEFLSST 1231


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 1.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 129  NAHWTDDPCVRTCDDPYLTNT 191
            N +W +DP VR  +  +L++T
Sbjct: 1211 NPYWIEDPDVRKGEVEFLSST 1231


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 120 CPENAHWTDDP 152
           CP N  W +DP
Sbjct: 518 CPNNYPWVNDP 528


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 330 TFNKITKKDYKSL 292
           TF+  TK DYKSL
Sbjct: 29  TFSDDTKPDYKSL 41


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 134 GIFRASIFGSAGLESHHGDNQEHD 63
           G FR SI  +A  +  +G+N E D
Sbjct: 210 GFFRRSITKNAVYQCKYGNNCEID 233


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,391
Number of Sequences: 336
Number of extensions: 1338
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8541369
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)