Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_E03
         (778 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK074074-1|BAB84900.1| 1731|Homo sapiens FLJ00145 protein protein.     30   8.1  
AK001214-1|BAA91559.1|  532|Homo sapiens protein ( Homo sapiens ...    30   8.1  
AB046789-1|BAB13395.1| 1140|Homo sapiens KIAA1569 protein protein.     30   8.1  

>AK074074-1|BAB84900.1| 1731|Homo sapiens FLJ00145 protein protein.
          Length = 1731

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 199  YISHNKVTLTSQHVRKATVQGFKPKITQKIHVLL 98
            Y+ H+K +L +QH     VQ FKPK   K   LL
Sbjct: 1677 YVKHSKYSLRAQHYINMPVQ-FKPKSAGKFEALL 1709


>AK001214-1|BAA91559.1|  532|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10352 fis, clone NT2RM2001152. ).
          Length = 532

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 199 YISHNKVTLTSQHVRKATVQGFKPKITQKIHVLL 98
           Y+ H+K +L +QH     VQ FKPK   K   LL
Sbjct: 478 YVKHSKYSLRAQHYINMPVQ-FKPKSAGKFEALL 510


>AB046789-1|BAB13395.1| 1140|Homo sapiens KIAA1569 protein protein.
          Length = 1140

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -1

Query: 199  YISHNKVTLTSQHVRKATVQGFKPKITQKIHVLL 98
            Y+ H+K +L +QH     VQ FKPK   K   LL
Sbjct: 1086 YVKHSKYSLRAQHYINMPVQ-FKPKSAGKFEALL 1118


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,353,533
Number of Sequences: 237096
Number of extensions: 2453878
Number of successful extensions: 9324
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9324
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)