Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_E03
         (778 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             29   0.064
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    25   1.0  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              25   1.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   3.2  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   7.3  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    21   9.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   9.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 28.7 bits (61), Expect = 0.064
 Identities = 16/74 (21%), Positives = 29/74 (39%)
 Frame = +3

Query: 429 TGRTVVALTTTIPRLMAEIPVDNYSHIHRSIEHLRSIVPTPLDHHRHLATNLADLRRYEH 608
           T       TTT   L+ +  +  + H+     HL+S      DHHR         +R + 
Sbjct: 118 TATAAATATTTATGLIKQETLQRHHHLQNHHHHLQSTAVQ--DHHRPYQQQQQQQQRQQQ 175

Query: 609 PDEMPEIKPSVLRL 650
             E   ++P  +++
Sbjct: 176 RQEERRLRPDEIKV 189


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 452 QGHHRPACNRWSFLPSSCLIYF 387
           +  + P  N W ++ S CL YF
Sbjct: 298 ESDYYPDLNEWLYILSGCLYYF 319


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 148 TVQGFKPKITQKIHVLLENKHLKKISAQE 62
           TV  +KPKI  K  +  +++HL  +  QE
Sbjct: 734 TVLAYKPKILGKPTISPDSRHLVTLDKQE 762


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 392 KLDKMMEGRTIDYRPDGGGLDYHNSPXDGRN 484
           KLD ++  RT  +RP G  L   N   D  N
Sbjct: 274 KLDSLVASRTWPFRPSGTVLKDINRQVDELN 304


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +3

Query: 480 EIPVDNYSHIHRSIEHLRSIVPTPLDHHRHLATNL 584
           E+  +  +H+   +E L+ +VP   +  RH    L
Sbjct: 55  ELEKNRRAHLRNCLEKLKVLVPLGPETSRHTTLGL 89


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 716 SVGVVLLFVVRPHILQAALKFAQPQNRRL 630
           +VG  +L V    ILQ  +KF Q Q   +
Sbjct: 391 NVGDEILEVENDKILQEVIKFRQKQRAEI 419


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 268 LSENLHNHQ 242
           + ENLHNHQ
Sbjct: 355 VGENLHNHQ 363


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,996
Number of Sequences: 438
Number of extensions: 5020
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24396777
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)