Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_E02
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 31 0.73
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 31 0.73
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 30 1.3
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 30 1.3
Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr... 30 1.7
AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical... 29 2.2
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z99710-12|CAI79158.1| 333|Caenorhabditis elegans Hypothetical p... 28 5.1
AL034393-28|CAI79175.1| 333|Caenorhabditis elegans Hypothetical... 28 5.1
AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear recep... 28 5.1
AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear horm... 28 5.1
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 28 6.8
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 28 6.8
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 28 6.8
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 28 6.8
U00037-5|AAA50659.1| 235|Caenorhabditis elegans Hypothetical pr... 28 6.8
AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical... 28 6.8
AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical ... 27 9.0
AF039053-12|AAC25872.3| 289|Caenorhabditis elegans Serpentine r... 27 9.0
>Z32683-4|CAA83629.1| 443|Caenorhabditis elegans Hypothetical
protein R07E5.6 protein.
Length = 443
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +2
Query: 362 KTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNKQVKLA 541
K ++K KR +K+ + SIN EMSR DK + +C K + K +Q +
Sbjct: 285 KKKEEKEKRRKEVKKNREEQLSINPEMSRNDKKDVVEEKSCLDKGAKDAQKKKKQQDVVD 344
Query: 542 KDKGRR 559
K K +R
Sbjct: 345 KKKEKR 350
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 31.1 bits (67), Expect = 0.73
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Frame = +2
Query: 245 NREACRYVR-GAWSECDSK----TNIRSRKLTLKKGD--PAN-C-EVVKTIQKKCKR-TC 394
N AC + + G WS+C +K R T + P + C ++ K I K C R +C
Sbjct: 1125 NEHACTWWQFGVWSDCSAKCGDGVQYRDANCTDRHRSVLPEHRCLKMEKIITKPCHRESC 1184
Query: 395 -RYEKSSWSECSINGE 439
+Y+ WS+CS++ E
Sbjct: 1185 PKYKLGEWSQCSVSCE 1200
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 31.1 bits (67), Expect = 0.73
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Frame = +2
Query: 245 NREACRYVR-GAWSECDSK----TNIRSRKLTLKKGD--PAN-C-EVVKTIQKKCKR-TC 394
N AC + + G WS+C +K R T + P + C ++ K I K C R +C
Sbjct: 1125 NEHACTWWQFGVWSDCSAKCGDGVQYRDANCTDRHRSVLPEHRCLKMEKIITKPCHRESC 1184
Query: 395 -RYEKSSWSECSINGE 439
+Y+ WS+CS++ E
Sbjct: 1185 PKYKLGEWSQCSVSCE 1200
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 407 SSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNKQVKL 538
S W CS+ R + + +++C + +T +CN N ++L
Sbjct: 1042 SEWGPCSVTCGSGRRVRTRGCQEASCPEQHIQTEECNLNSCLEL 1085
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 407 SSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNKQVKL 538
S W CS+ R + + +++C + +T +CN N ++L
Sbjct: 1042 SEWGPCSVTCGSGRRVRTRGCQEASCPEQHIQTEECNLNSCLEL 1085
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +2
Query: 407 SSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTRKCNKNKQVKL 538
S W CS+ R + + +++C + +T +CN N ++L
Sbjct: 1042 SEWGPCSVTCGSGRRVRTRGCQEASCPEQHIQTEECNLNSCLEL 1085
>Z81086-3|CAD56586.1| 711|Caenorhabditis elegans Hypothetical
protein F53B6.2b protein.
Length = 711
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 18/79 (22%)
Frame = +2
Query: 245 NREACRYVRGAWSECDSKT----NIRSRKLTLK---KGDPAN-----CEVVKTIQKKCKR 388
N R+ G WSEC KT ++R ++ K G+ N CE + +++ R
Sbjct: 472 NELVARWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICESLASVRPPETR 531
Query: 389 TC------RYEKSSWSECS 427
C R+E S WSECS
Sbjct: 532 PCHREDCPRWEASQWSECS 550
>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical protein
F53B6.2a protein.
Length = 1045
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 18/79 (22%)
Frame = +2
Query: 245 NREACRYVRGAWSECDSKT----NIRSRKLTLK---KGDPAN-----CEVVKTIQKKCKR 388
N R+ G WSEC KT ++R ++ K G+ N CE + +++ R
Sbjct: 806 NELVARWDIGHWSECRQKTCHVAGYQARGISCKVTFHGEIRNVDNSICESLASVRPPETR 865
Query: 389 TC------RYEKSSWSECS 427
C R+E S WSECS
Sbjct: 866 PCHREDCPRWEASQWSECS 884
>AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical
protein Y87G2A.20 protein.
Length = 197
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +2
Query: 329 KKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTR 508
KKG AN KT K KR + +K W++ + R K+ + D ++RK +
Sbjct: 24 KKGGKAN----KTKTKATKRKAQMKKK-WTKTAQKKRKERKKADKAKKKTKKDAAKRKKK 78
Query: 509 KCNKNKQVKLAKDKGRRNRQ 568
+K K+ K A+ K + +Q
Sbjct: 79 SKDKKKKQK-AQKKAEKPKQ 97
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/104 (24%), Positives = 44/104 (42%)
Frame = +2
Query: 194 WEENDHEVLIRSARGAKNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQ 373
W E DH+ L + + + V+G S+ + +T + S KK D + +
Sbjct: 172 WMETDHKELFSITEDGELSDETKKVKGHDSKIEKQT-VPSSSSNPKK-DEHKRNRNRRSR 229
Query: 374 KKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKT 505
+ + R + S S+ S + SR + SNS S D S ++
Sbjct: 230 SRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRS 273
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 29.1 bits (62), Expect = 2.9
Identities = 25/104 (24%), Positives = 44/104 (42%)
Frame = +2
Query: 194 WEENDHEVLIRSARGAKNREACRYVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQ 373
W E DH+ L + + + V+G S+ + +T + S KK D + +
Sbjct: 172 WMETDHKELFSITEDGELSDETKKVKGHDSKIEKQT-VPSSSSNPKK-DEHKRNRNRRSR 229
Query: 374 KKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKT 505
+ + R + S S+ S + SR + SNS S D S ++
Sbjct: 230 SRTRSRERTSRRSRSKESPRSKRSRRSRSSSNSSSESDSSSSRS 273
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Frame = +2
Query: 353 EVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTC-DQSRRKTRKCNKNKQ 529
E +T+++ K+T + KSS ++ R + S+S ST D R + + + K+
Sbjct: 343 ETNRTLEESLKKTLKINKSSEKMEKPRKDIRRAPRSSSSSSSTLRDAEREQDIERRREKR 402
Query: 530 VKLAKDKGRRNRQ 568
+ + + RR+ +
Sbjct: 403 ARRFRSRRRRSEE 415
>Z99710-12|CAI79158.1| 333|Caenorhabditis elegans Hypothetical
protein Y18D10A.22 protein.
Length = 333
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 375 FWMVLTTSQLAGSPFFRVNFLERIFVL--ESHSLQAPRTYRHASLF 244
FW +L + QL P F + L E HS TYRH + F
Sbjct: 45 FWNLLESIQLEKHPVMTWKFCNLVHKLLQEGHSTVPQETYRHLNRF 90
>AL034393-28|CAI79175.1| 333|Caenorhabditis elegans Hypothetical
protein Y18D10A.22 protein.
Length = 333
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Frame = -1
Query: 375 FWMVLTTSQLAGSPFFRVNFLERIFVL--ESHSLQAPRTYRHASLF 244
FW +L + QL P F + L E HS TYRH + F
Sbjct: 45 FWNLLESIQLEKHPVMTWKFCNLVHKLLQEGHSTVPQETYRHLNRF 90
>AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear receptor
NHR-92 protein.
Length = 362
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 296 KTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEK 406
+T +R + K+ + NC +V TI+ CK+ CRY K
Sbjct: 39 RTVVRGHEYRCKQME--NCLIVSTIRNMCKK-CRYTK 72
>AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 92 protein.
Length = 354
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 296 KTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEK 406
+T +R + K+ + NC +V TI+ CK+ CRY K
Sbjct: 31 RTVVRGHEYRCKQME--NCLIVSTIRNMCKK-CRYTK 64
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 341 PANCEVVKTIQKKCKRTCRYEKSSW--SECSINGEMSRTDKLKSNSDSTCDQSRRKTRKC 514
P VV+ + + C E+ + SE S N + SR ++ ++ S+ D+S + RKC
Sbjct: 388 PECIPVVEQLCEPCSEDEEDEEEDYPRSEKSGNSQKSRRSRMSISTRSSGDESASRPRKC 447
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 341 PANCEVVKTIQKKCKRTCRYEKSSW--SECSINGEMSRTDKLKSNSDSTCDQSRRKTRKC 514
P VV+ + + C E+ + SE S N + SR ++ ++ S+ D+S + RKC
Sbjct: 388 PECIPVVEQLCEPCSEDEEDEEEDYPRSEKSGNSQKSRRSRMSISTRSSGDESASRPRKC 447
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 341 PANCEVVKTIQKKCKRTCRYEKSSW--SECSINGEMSRTDKLKSNSDSTCDQSRRKTRKC 514
P VV+ + + C E+ + SE S N + SR ++ ++ S+ D+S + RKC
Sbjct: 388 PECIPVVEQLCEPCSEDEEDEEEDYPRSEKSGNSQKSRRSRMSISTRSSGDESASRPRKC 447
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 27.9 bits (59), Expect = 6.8
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 341 PANCEVVKTIQKKCKRTCRYEKSSW--SECSINGEMSRTDKLKSNSDSTCDQSRRKTRKC 514
P VV+ + + C E+ + SE S N + SR ++ ++ S+ D+S + RKC
Sbjct: 388 PECIPVVEQLCEPCSEDEEDEEEDYPRSEKSGNSQKSRRSRMSISTRSSGDESASRPRKC 447
>U00037-5|AAA50659.1| 235|Caenorhabditis elegans Hypothetical
protein T20H4.2 protein.
Length = 235
Score = 27.9 bits (59), Expect = 6.8
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Frame = +2
Query: 263 YVRGAWSECDSKTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCRYEKSSWSE---CSIN 433
Y R + S TN KK ++ + K ++T + +K W E S +
Sbjct: 19 YRRKRRRDSSSTTNSEVSDNDRKKRQNEKRRSRESSKMKHQKTAKRDKPMWKEEGEISCD 78
Query: 434 GEMSRTDKLKSNSDSTCDQSRRKT---RKCNKNKQVKLAKDKGRRNRQ 568
E + SN+ S C RR+T R+ ++N + + R RQ
Sbjct: 79 SESDVCNSSSSNNRSRCRDRRRRTDYGRRRHRNSDSRSHERWSTRRRQ 126
>AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical
protein Y119C1B.1 protein.
Length = 273
Score = 27.9 bits (59), Expect = 6.8
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +2
Query: 329 KKGDPANCEVVKTIQKKCKRTCRYEKSSWSECSINGEMSRTDKLKSNSDSTCDQSRRKTR 508
K P N + ++ K K T + +K S+ + + K+KS+ D SR+ T+
Sbjct: 189 KPSKPENDKSYYSVPSKDKSTSKKQKMLRSDMADSASPKSLKKIKSSKDPLRSSSRKTTK 248
Query: 509 KCNK 520
K
Sbjct: 249 PSKK 252
>AF078788-7|AAC26958.1| 227|Caenorhabditis elegans Hypothetical
protein ZC190.8 protein.
Length = 227
Score = 27.5 bits (58), Expect = 9.0
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +2
Query: 296 KTNIRSRKLTLKKGDPANCEVVKTIQKKCKRTCR----YEKSSWSECSINGEMSRTDKLK 463
K+N +S + + G P N + T +K K++ R EK+ +E S + E +TDK +
Sbjct: 158 KSNRKSTDSSTELGSPTNSQYSTTTRKSSKKSTRSDRKMEKTQRNEKSEHTE-EQTDKTE 216
Query: 464 SNSDSTCDQ 490
ST +
Sbjct: 217 KTVKSTASR 225
>AF039053-12|AAC25872.3| 289|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 18 protein.
Length = 289
Score = 27.5 bits (58), Expect = 9.0
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = -2
Query: 617 LFINNYRKIFKAAHVL----TGDFCDPYL*QA*LAYSCYISEFCAYFGRKSNRC----WT 462
+F +NYRK+ + +L + + + A Y+ Y+SE CA G N C WT
Sbjct: 117 IFYHNYRKLCPSIFILLIAVSYGLAENLVLHAVCNYTIYLSENCAALGCAVNSCFNKYWT 176
Query: 461 LA 456
++
Sbjct: 177 IS 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,818,488
Number of Sequences: 27780
Number of extensions: 302764
Number of successful extensions: 948
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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