Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_D22
(828 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 29 0.059
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 27 0.24
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 24 1.3
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 24 1.7
DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 23 3.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.9
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.9
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.9
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.2
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 28.7 bits (61), Expect = 0.059
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 208 SDQTWCNSSFIYNPKFEKFEEQHVPYQS-VDDHGR 309
S TWCN S + + Q VPY + DD GR
Sbjct: 143 SSSTWCNYSAYSSASRHHVDHQPVPYLTPADDRGR 177
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 26.6 bits (56), Expect = 0.24
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +1
Query: 184 RCQPEIFASDQTWCNSSFIYNPKFEKFEEQHVPYQSVDDH 303
+ +PE+ S++T CN S +P+ E+ + V +Q+ +H
Sbjct: 292 KVEPELSDSEKTLCNGSKGISPEQEELIHRLVYFQNEYEH 331
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 24.2 bits (50), Expect = 1.3
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 331 HIKIKVRPGVPVDFKMLYKPIEHFP 405
HI I + + V +++Y+P HFP
Sbjct: 676 HIVIGMNLIIHVGTQLIYRPFSHFP 700
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = +1
Query: 658 IDFGSNFDDQEAGLXALMQVMTCTKEIGWR 747
+ F S F ++ + + V CT + WR
Sbjct: 231 VSFASLFQQEDIEMFVMPTVRNCTGDTSWR 260
>DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein.
Length = 305
Score = 23.0 bits (47), Expect = 3.0
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = +2
Query: 500 VLSQRMFDWDSEPL*KNQFIHITI---KTDTKSPYRL 601
V S+ + D P K QF+HIT+ +T T +P L
Sbjct: 147 VFSEVLLFLDYNPSQKRQFLHITLASGRTLTVTPSHL 183
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.9
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Frame = +2
Query: 179 TLDVNLKSSQATKLGA------TVLLFTTLNLKSLKNNTCPIKVLMITAERRSSHRVT 334
TLDV K A KL A T +L L ++ ++V + AERR SH T
Sbjct: 1433 TLDVAFKKRFA-KLNANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERRKSHMQT 1489
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.9
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Frame = +2
Query: 179 TLDVNLKSSQATKLGA------TVLLFTTLNLKSLKNNTCPIKVLMITAERRSSHRVT 334
TLDV K A KL A T +L L ++ ++V + AERR SH T
Sbjct: 1433 TLDVAFKKRFA-KLNANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERRKSHMQT 1489
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.9
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Frame = +2
Query: 179 TLDVNLKSSQATKLGA------TVLLFTTLNLKSLKNNTCPIKVLMITAERRSSHRVT 334
TLDV K A KL A T +L L ++ ++V + AERR SH T
Sbjct: 1433 TLDVAFKKRFA-KLNANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERRKSHMQT 1489
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 22.6 bits (46), Expect = 3.9
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Frame = +2
Query: 179 TLDVNLKSSQATKLGA------TVLLFTTLNLKSLKNNTCPIKVLMITAERRSSHRVT 334
TLDV K A KL A T +L L ++ ++V + AERR SH T
Sbjct: 1433 TLDVAFKKRFA-KLNANGTNAGTPVLSRRLTMRRETMKALEVRVNSVMAERRKSHMQT 1489
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 721 TCTKEIGWRT-EARRIIVLFTDAPYHXMGDGKMI 819
T ++ IG T + +++ FT+ ++ GDGK +
Sbjct: 2308 TTSRPIGTDTSDDYKVVCYFTNWAWYRQGDGKYL 2341
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,212
Number of Sequences: 336
Number of extensions: 4677
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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