Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_D22
(828 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 145 4e-35
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 145 4e-35
U97009-12|ABR92602.1| 532|Caenorhabditis elegans Udp-glucuronos... 31 1.3
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr... 30 1.8
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 30 1.8
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 30 1.8
U64858-8|AAB18286.3| 288|Caenorhabditis elegans Serpentine rece... 30 2.3
AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protei... 30 2.3
AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A prot... 30 2.3
U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw (imit... 29 4.1
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 29 4.1
Z78411-1|CAB01644.2| 175|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 28 9.4
AL132943-4|CAB81975.1| 690|Caenorhabditis elegans Hypothetical ... 28 9.4
AL032653-1|CAA21714.1| 712|Caenorhabditis elegans Hypothetical ... 28 9.4
AC006641-4|AAF39819.2| 477|Caenorhabditis elegans Hypothetical ... 28 9.4
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 145 bits (351), Expect = 4e-35
Identities = 79/256 (30%), Positives = 133/256 (51%), Gaps = 17/256 (6%)
Frame = +1
Query: 112 TCSSCISYASERCVWCS----EAETKHTRCQPEIFASDQTWCNSSFIYNP--KFEKFEEQ 273
TCS+CI Y E C WC + + + RC + C +S+I +P K + E+
Sbjct: 49 TCSACIQY-HESCAWCGAPMFDEKKPYARCDSRAKLMEHG-CPNSYIEDPATKLDITEDS 106
Query: 274 HVPYQS-VDDHGRKTIVTPGHIKIKVRPGVPVDFKMLYKPIEHFPLDVYFLMDNSYTMRQ 450
+ Q V+ + P + +++RP V F + Y+ +P+D+Y+LMD SY+M+
Sbjct: 107 KLSDQGQVESEEEAVQIKPQEMYVEIRPKSRVRFNVTYRQAVDYPVDLYYLMDLSYSMKD 166
Query: 451 FQNELKSQAINILKELSAFTKNVRLGFGTFVEKPVYPYYDKNRYQKSIP----------F 600
+ +L + + + TKN RLGFG+F++K + P+ D ++ P F
Sbjct: 167 DKQKLSELGDLLAERMRTVTKNFRLGFGSFIDKKLMPFIDPRIEKQLSPCPTPCAEPYGF 226
Query: 601 ENVLSLTADISKLNNTVRQIDFGSNFDDQEAGLXALMQVMTCTKEIGWRTEARRIIVLFT 780
++ +SLT + +K V + + N D E G A++Q + C K IGWR AR++IV T
Sbjct: 227 KHQMSLTTNTAKFKAEVDKAEISGNLDAPEGGFDAVVQALACNKTIGWRERARKMIVFST 286
Query: 781 DAPYHXMGDGKMIGIL 828
DA +H GDG++ G++
Sbjct: 287 DAGFHFAGDGRLAGVV 302
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 145 bits (351), Expect = 4e-35
Identities = 79/256 (30%), Positives = 133/256 (51%), Gaps = 17/256 (6%)
Frame = +1
Query: 112 TCSSCISYASERCVWCS----EAETKHTRCQPEIFASDQTWCNSSFIYNP--KFEKFEEQ 273
TCS+CI Y E C WC + + + RC + C +S+I +P K + E+
Sbjct: 49 TCSACIQY-HESCAWCGAPMFDEKKPYARCDSRAKLMEHG-CPNSYIEDPATKLDITEDS 106
Query: 274 HVPYQS-VDDHGRKTIVTPGHIKIKVRPGVPVDFKMLYKPIEHFPLDVYFLMDNSYTMRQ 450
+ Q V+ + P + +++RP V F + Y+ +P+D+Y+LMD SY+M+
Sbjct: 107 KLSDQGQVESEEEAVQIKPQEMYVEIRPKSRVRFNVTYRQAVDYPVDLYYLMDLSYSMKD 166
Query: 451 FQNELKSQAINILKELSAFTKNVRLGFGTFVEKPVYPYYDKNRYQKSIP----------F 600
+ +L + + + TKN RLGFG+F++K + P+ D ++ P F
Sbjct: 167 DKQKLSELGDLLAERMRTVTKNFRLGFGSFIDKKLMPFIDPRIEKQLSPCPTPCAEPYGF 226
Query: 601 ENVLSLTADISKLNNTVRQIDFGSNFDDQEAGLXALMQVMTCTKEIGWRTEARRIIVLFT 780
++ +SLT + +K V + + N D E G A++Q + C K IGWR AR++IV T
Sbjct: 227 KHQMSLTTNTAKFKAEVDKAEISGNLDAPEGGFDAVVQALACNKTIGWRERARKMIVFST 286
Query: 781 DAPYHXMGDGKMIGIL 828
DA +H GDG++ G++
Sbjct: 287 DAGFHFAGDGRLAGVV 302
>U97009-12|ABR92602.1| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform b protein.
Length = 532
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +1
Query: 223 CNSSFIYNPKFEKFEEQHVPYQS--VDDHGRKTIVTPGHIKIKVRPGV 360
C + +YNP F + V + + DHG T+ P HI +K G+
Sbjct: 18 CKNILVYNPIFGYSHAKFVSQLANIIADHGHNTVFQPFHIALKNTDGL 65
>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical
protein K04B12.1 protein.
Length = 1764
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 97 CGQFKTCSSCISYASERCVWCS 162
C + TCSSC+S + C WCS
Sbjct: 576 CSGYGTCSSCMS-SEYNCAWCS 596
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +1
Query: 49 VTVLMIYFCFASGTSICGQFKTCSSCISYASERCVWC--SEAETKHTRC 189
V V M Y S C +C+ C+ C WC +++ T RC
Sbjct: 429 VIVQMPYGIILEELSTCSHHSSCTECLVSVDPLCQWCHPTQSCTTSARC 477
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 97 CGQFKTCSSCISYASERCVWCSEAETKHTRCQP 195
C C SC++ SE C +C ++ET+ C P
Sbjct: 398 CLMLSNCDSCVT--SEHCGFCEDSETRTGFCLP 428
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 97 CGQFKTCSSCISYASERCVWCS 162
C + TCSSC+S + C WCS
Sbjct: 578 CSGYGTCSSCMS-SEYNCAWCS 598
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +1
Query: 49 VTVLMIYFCFASGTSICGQFKTCSSCISYASERCVWC--SEAETKHTRC 189
V V M Y S C +C+ C+ C WC +++ T RC
Sbjct: 431 VIVQMPYGIILEELSTCSHHSSCTECLVSVDPLCQWCHPTQSCTTSARC 479
>U64858-8|AAB18286.3| 288|Caenorhabditis elegans Serpentine
receptor, class t protein25 protein.
Length = 288
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 284 IKVLMITAERRSSHRVTSKLKYDLVFQSILKCFINL*SISRSMFIFSWITLI 439
I +L+ A + + S Y +++QSI CFIN +S S+++ L+
Sbjct: 178 ITILIWKARKTGNSHDLSSQSYQILYQSIAVCFIN--QVSSSVYVIMNFVLV 227
>AC024825-1|ABA00169.1| 1908|Caenorhabditis elegans Plexin protein 1
protein.
Length = 1908
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = +1
Query: 88 TSICGQFKT-CSSCISYASERCVWCSEAE--TKHTRCQPEIFASDQTWCNSSFIYNPKFE 258
TS C T C +C+S C WC T+ C+ E+ + + W + P+
Sbjct: 494 TSRCEALSTQCDTCLSSRDPYCGWCVSNNHCTQEESCEREVPHTSRGWLDFQNSKCPRIR 553
Query: 259 KFEEQHVPYQSVD 297
+ + + D
Sbjct: 554 SVKPDQIQINTAD 566
>AB080022-1|BAB85224.1| 1951|Caenorhabditis elegans plexin A
protein.
Length = 1951
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 3/73 (4%)
Frame = +1
Query: 88 TSICGQFKT-CSSCISYASERCVWCSEAE--TKHTRCQPEIFASDQTWCNSSFIYNPKFE 258
TS C T C +C+S C WC T+ C+ E+ + + W + P+
Sbjct: 500 TSRCEALSTQCDTCLSSRDPYCGWCVSNNHCTQEESCEREVPHTSRGWLDFQNSKCPRIR 559
Query: 259 KFEEQHVPYQSVD 297
+ + + D
Sbjct: 560 SVKPDQIQINTAD 572
>U00032-5|AAA50636.2| 1009|Caenorhabditis elegans Yeast isw
(imitation swi) homologprotein 1 protein.
Length = 1009
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +1
Query: 574 NRYQKSIPFENVLSLTADISKLNNTVRQIDFGSNFDDQEAGLXALMQVMTCTKEIGWR 747
N ++K P N + L D + N +R + FD +++V T K++ WR
Sbjct: 198 NEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYEMMLKVKTQLKKLNWR 255
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = +1
Query: 100 GQFKTCSSC---ISYASERCVWCSEAETK 177
G+ TC C ++ ++CVWCS AE K
Sbjct: 37 GKPGTCQYCKLNAAFHDQKCVWCSHAERK 65
>Z78411-1|CAB01644.2| 175|Caenorhabditis elegans Hypothetical
protein F02D8.1 protein.
Length = 175
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/76 (25%), Positives = 29/76 (38%)
Frame = +1
Query: 427 DNSYTMRQFQNELKSQAINILKELSAFTKNVRLGFGTFVEKPVYPYYDKNRYQKSIPFEN 606
DN Y F+ S +N+L F + G F +P P + R Q
Sbjct: 35 DNDYRKSAFEKWKSSFNLNLLANDQQFGRRTSRGNSKFFSRPPLPSNPRPRRQSLAATLR 94
Query: 607 VLSLTADISKLNNTVR 654
S+ D+ K+ +T R
Sbjct: 95 RTSIKDDLKKIWDTRR 110
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
protein W05B2.2 protein.
Length = 1278
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = -2
Query: 731 LVQVITCIRAXKPASWSSKFEPKSIWRTVLFNFDMSAVKDNTFSNGM 591
+V++ C++ +P W S EP++ R S FS+G+
Sbjct: 767 IVRIDKCLQGSRPEIWQSTAEPRACSRDAQCPSTTSCYAPTPFSSGL 813
>AL132943-4|CAB81975.1| 690|Caenorhabditis elegans Hypothetical
protein Y116F11B.7 protein.
Length = 690
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -1
Query: 408 EREMLYRFIKHFKIDWNTRSYFNFDVTRCDDRLSAVI 298
++E+ RF ++ W R++FN +VT +D L+ +I
Sbjct: 478 DKEIAARFKNSLQLSWCNRTFFNDEVT--EDYLNTII 512
>AL032653-1|CAA21714.1| 712|Caenorhabditis elegans Hypothetical
protein Y54E5B.1a protein.
Length = 712
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/58 (25%), Positives = 22/58 (37%)
Frame = +1
Query: 97 CGQFKTCSSCISYASERCVWCSEAETKHTRCQPEIFASDQTWCNSSFIYNPKFEKFEE 270
C Q +CS C+ C W ++ RC +W FI N F + E+
Sbjct: 497 CAQQTSCSKCVQLQDPHCAW----DSSIARC-----VHGGSWTGDQFIQNMVFGQSEQ 545
>AC006641-4|AAF39819.2| 477|Caenorhabditis elegans Hypothetical
protein F45D11.6 protein.
Length = 477
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -1
Query: 408 EREMLYRFIKHFKIDWNTRSYFNFDVTRCDDRLSAVI 298
++E+ RF ++ W R++FN +VT +D L+ +I
Sbjct: 265 DKEIAARFKNSLQLSWCNRTFFNDEVT--EDYLNTII 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,494,155
Number of Sequences: 27780
Number of extensions: 432649
Number of successful extensions: 1365
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1363
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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