Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_D21
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 257 5e-69
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 64 1e-10
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 64 1e-10
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 44 9e-05
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 44 1e-04
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 40 0.001
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 32 0.50
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 1.2
U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam ... 29 2.7
Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 4.7
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 4.7
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 257 bits (630), Expect = 5e-69
Identities = 126/164 (76%), Positives = 137/164 (83%)
Frame = +3
Query: 255 DVQFEDNLPPILNALEVQNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSP 434
DVQF++NLPPILN LEV RSPRL+LEV+QHLG+N VR IAMDGTEGLVRGQPV D+G P
Sbjct: 81 DVQFDENLPPILNGLEVVGRSPRLILEVSQHLGDNVVRCIAMDGTEGLVRGQPVADTGDP 140
Query: 435 IRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVD 614
I+IPVG ETLGRI+NVIGEPIDERGPI + AAIHAEAPEFV+MSV+QEILVTGIKVVD
Sbjct: 141 IKIPVGPETLGRIMNVIGEPIDERGPIASKNFAAIHAEAPEFVEMSVEQEILVTGIKVVD 200
Query: 615 LLAPYAXXXXXXXXXXXXXXXTVLIMELINNVAKAHGGYSVFAG 746
LLAPYA TVLIMELINNVAKAHGGYSVFAG
Sbjct: 201 LLAPYAKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYSVFAG 244
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/97 (30%), Positives = 53/97 (54%)
Frame = +3
Query: 336 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 515
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 63 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 122
Query: 516 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAP 626
+ + + +AP + +E +VTG+K VD L P
Sbjct: 123 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVP 159
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/97 (30%), Positives = 53/97 (54%)
Frame = +3
Query: 336 VAQHLGENTVRTIAMDGTEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDERGPI 515
+A +L + V + + + G V +G+ + +PVG LGR+++ +G PID +GPI
Sbjct: 90 MAMNLDVDNVGVVVFGNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKGPI 149
Query: 516 PTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAP 626
+ + + +AP + +E +VTG+K VD L P
Sbjct: 150 ANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVP 186
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 44.4 bits (100), Expect = 9e-05
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +3
Query: 348 LGENTVRTIAMDGTEGLVRGQPVLD-SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTD 524
+ +N +GT G+ + + +G +R PV + LGRI N G+PID+ P+ +
Sbjct: 71 ISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAE 130
Query: 525 KTAAIHAEAPEFVDMSVQQEILVTGIKVVDLL 620
I+ + +E++ TGI +D++
Sbjct: 131 DFLDINGQPINPWSRIYPEEMIQTGISAIDVM 162
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/49 (38%), Positives = 29/49 (59%)
Frame = +3
Query: 480 VIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGIKVVDLLAP 626
V+G PID +GPI + + + +AP + +E +VTG+K VD L P
Sbjct: 103 VLGNPIDGKGPIANARRSRVEVKAPGIIPRLSVREPMVTGVKAVDSLVP 151
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/66 (30%), Positives = 35/66 (53%)
Frame = +3
Query: 423 SGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPEFVDMSVQQEILVTGI 602
+G R PV + LGRI N G+PID+ P+ + I+ + + +E++ TGI
Sbjct: 109 TGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDYLDINGQPINPFNRIYPEEMIQTGI 168
Query: 603 KVVDLL 620
+D++
Sbjct: 169 SAIDVM 174
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3
Query: 387 TEGLVRGQPVLDSGSPIRIPVGAETLGRIINVIGEPIDE 503
T G+ G PVL +G P+ + +G +G I + I P+ +
Sbjct: 59 TSGVTIGDPVLRTGKPLSVELGPGIMGSIFDGIQRPLKD 97
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = -2
Query: 607 TFIPVTRISCCTDMSTNSGASA*IAAVLSVGMGPRS-SIGSPITL-MMRPRV---SAPTG 443
TF PVT +S + +T + + + P + + +P T+ M P + P
Sbjct: 468 TFYPVTTVSTMSPPTTVTVPTTPTPVPTTTNTPPANPTTATPTTVGTMTPSTGTTTVPVP 527
Query: 442 IRMGEPESSTGCPRTKPSVPS 380
G P + T P TKP+VPS
Sbjct: 528 TTTGSPTTQTTAPVTKPTVPS 548
>U42830-4|AAC48277.1| 487|Caenorhabditis elegans Neuronal igcam
protein 3 protein.
Length = 487
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +3
Query: 381 DGTEGLVRGQPV-LDSGSPIRIPVGAETLGRIINVIGEPIDERGPIPTDKTAAIHAEAPE 557
D +G + G+P+ +D G ++ P G E + ++ N GEP+DE A I + E
Sbjct: 152 DTVKGALLGEPITIDCG--VKGPSGKEPMIQMTNGNGEPLDEEIWTIAGNEATIDSLKKE 209
Query: 558 FVDMSV 575
+++V
Sbjct: 210 HAELTV 215
>Z70684-5|CAA94600.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.5 protein.
Length = 233
Score = 29.1 bits (62), Expect = 3.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 668 CGQNCIDYGTDQQCCQSPW 724
C C+ Y TDQ+CC+ +
Sbjct: 168 CKSGCLGYNTDQECCRGAY 186
>Z70684-3|CAA94598.1| 233|Caenorhabditis elegans Hypothetical
protein F28D1.3 protein.
Length = 233
Score = 29.1 bits (62), Expect = 3.5
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +2
Query: 668 CGQNCIDYGTDQQCCQSPW 724
C C+ Y TDQ+CC+ +
Sbjct: 168 CKSGCLGYNTDQECCRGAY 186
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/73 (26%), Positives = 27/73 (36%)
Frame = -2
Query: 568 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPS 389
+ T G +A +A M RS P+T M P + P S+ PR
Sbjct: 9 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 68
Query: 388 VPSMAMVRTVFSP 350
P+ A +T P
Sbjct: 69 TPTAAPPKTCAPP 81
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/73 (26%), Positives = 27/73 (36%)
Frame = -2
Query: 568 MSTNSGASA*IAAVLSVGMGPRSSIGSPITLMMRPRVSAPTGIRMGEPESSTGCPRTKPS 389
+ T G +A +A M RS P+T M P + P S+ PR
Sbjct: 138 LPTEGGPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPSRSSAAPRATAP 197
Query: 388 VPSMAMVRTVFSP 350
P+ A +T P
Sbjct: 198 TPTAAPPKTCAPP 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,668,024
Number of Sequences: 27780
Number of extensions: 383793
Number of successful extensions: 1079
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1079
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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