Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_D19
         (764 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC026301-3|AAK68898.2|  332|Caenorhabditis elegans Hypothetical ...    31   0.68 
AC006617-4|AAF39771.1|  291|Caenorhabditis elegans Hypothetical ...    31   0.90 
U80027-19|AAC48129.2|  313|Caenorhabditis elegans F-box a protei...    29   2.7  
AC006714-12|AAK29719.2|  305|Caenorhabditis elegans F-box a prot...    29   3.6  
U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain (pr...    29   4.8  
AF106573-1|AAC78152.2|  336|Caenorhabditis elegans Hypothetical ...    29   4.8  
AF067220-9|AAC16977.1|  305|Caenorhabditis elegans Hypothetical ...    29   4.8  
AC084154-9|AAK29865.1|  285|Caenorhabditis elegans F-box a prote...    29   4.8  
AC024836-1|AAK39347.2|  475|Caenorhabditis elegans Hypothetical ...    29   4.8  
AL033514-21|CAA22105.1|  288|Caenorhabditis elegans Hypothetical...    28   6.3  
AF024499-2|AAT48621.1|  576|Caenorhabditis elegans Hypothetical ...    28   6.3  
AF024499-1|AAT48620.1|  941|Caenorhabditis elegans Hypothetical ...    28   6.3  
U64849-1|AAC48052.3|  936|Caenorhabditis elegans Daf-12, redunda...    28   8.4  
U13875-10|AAA21159.1|  332|Caenorhabditis elegans F-box synaptic...    28   8.4  
AF100307-11|AAC68929.1|  304|Caenorhabditis elegans Hypothetical...    28   8.4  
AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical ...    28   8.4  

>AC026301-3|AAK68898.2|  332|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.7 protein.
          Length = 332

 Score = 31.5 bits (68), Expect = 0.68
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 619 SASLVGIPEEILWKILLNLPVEDILSLCKTCNALKTMID 735
           SASL+ +P ++  +IL  L   D+L   K C  LK  +D
Sbjct: 29  SASLIDLPLDVANQILEKLETFDLLRCRKVCRGLKNAVD 67


>AC006617-4|AAF39771.1|  291|Caenorhabditis elegans Hypothetical
           protein C39B5.7 protein.
          Length = 291

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +1

Query: 637 IPEEILWKILLNLPVEDILSLCKTCNALKTMIDDN 741
           +P EI  +IL  LP  D+LS  K C +L++ +D +
Sbjct: 1   MPLEISDEILSKLPAMDLLSCRKVCKSLRSAVDQS 35



 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +1

Query: 661 ILLNLPVEDILSLCKTCNALKTMIDDNCLWH 753
           +L N P +DIL++  +C A   ++ D  LWH
Sbjct: 135 VLYNFPHDDILNIISSCQA--EVLKDIVLWH 163


>U80027-19|AAC48129.2|  313|Caenorhabditis elegans F-box a protein
           protein 64 protein.
          Length = 313

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +1

Query: 625 SLVGIPEEILWKILLNLPVEDILSLCKTCNALKTMIDDN 741
           SL+ +P +   ++L  L   D+L+  K C  LKT ID N
Sbjct: 18  SLLNLPLDTANQVLEKLDPLDLLASRKVCQGLKTAIDRN 56


>AC006714-12|AAK29719.2|  305|Caenorhabditis elegans F-box a protein
           protein 63 protein.
          Length = 305

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +1

Query: 625 SLVGIPEEILWKILLNLPVEDILSLCKTCNALKTMID 735
           SL+ +P E+   +L  L + D+L   K C AL+T +D
Sbjct: 18  SLLEMPLEVANLVLEKLELIDLLRARKVCTALRTAVD 54


>U23448-5|AAL27227.1|  912|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform c
           protein.
          Length = 912

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
 Frame = +1

Query: 460 THSTCLRITQYVVSS--TVENVPSMFRDLKNFAHTVKNNIISPVKSSI---LKYY--GYP 618
           T+ TC     Y ++S  T ++  +M ++++   H V+  ++SP+ S      +YY   YP
Sbjct: 800 TYYTCTDNVVYDITSWATCKSQRAMLKNMRAHTHNVQYRLLSPMNSDFDAQSQYYNSSYP 859

Query: 619 SAS 627
           S+S
Sbjct: 860 SSS 862


>AF106573-1|AAC78152.2|  336|Caenorhabditis elegans Hypothetical
           protein F52D2.1 protein.
          Length = 336

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/46 (28%), Positives = 29/46 (63%)
 Frame = +1

Query: 598 LKYYGYPSASLVGIPEEILWKILLNLPVEDILSLCKTCNALKTMID 735
           L+  G  S++L+ +P +++  ++  L   D+L L K C++LK+ ++
Sbjct: 25  LQNEGVMSSNLLDMPLDVINVVMGKLEPMDLLRLRKVCHSLKSAVN 70


>AF067220-9|AAC16977.1|  305|Caenorhabditis elegans Hypothetical
           protein C33E10.2 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = +1

Query: 625 SLVGIPEEILWKILLNLPVEDILSLCKTCNALKTMIDDN 741
           +L+ +P E+L +I+  +   + L+L K C  L+ ++D+N
Sbjct: 17  TLIELPTEMLTEIIKRVNPINRLALRKVCRILRKIVDEN 55


>AC084154-9|AAK29865.1|  285|Caenorhabditis elegans F-box a protein
           protein 13 protein.
          Length = 285

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 625 SLVGIPEEILWKILLNLPVEDILSLCKTCNALKTMIDD 738
           +L+ +P EI  +IL  +   D L+  K C +LKT +D+
Sbjct: 7   TLLDLPLEIANQILEKMEPMDRLTARKVCRSLKTAVDE 44


>AC024836-1|AAK39347.2|  475|Caenorhabditis elegans Hypothetical
           protein Y59E1A.1 protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 13/46 (28%), Positives = 29/46 (63%)
 Frame = +1

Query: 598 LKYYGYPSASLVGIPEEILWKILLNLPVEDILSLCKTCNALKTMID 735
           L+  G  S++L+ +P +++  ++  L   D+L L K C++LK+ ++
Sbjct: 25  LQNEGVMSSNLLDMPLDVINVVMGKLEPMDLLRLRKVCHSLKSAVN 70


>AL033514-21|CAA22105.1|  288|Caenorhabditis elegans Hypothetical
           protein Y75B8A.21 protein.
          Length = 288

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 637 IPEEILWKILLNLPVEDILSLCKTCNALKTMIDD 738
           IPE IL KIL  L + D L + KT    +T +D+
Sbjct: 30  IPESILIKILEKLELIDRLVIRKTSKKFRTTVDN 63


>AF024499-2|AAT48621.1|  576|Caenorhabditis elegans Hypothetical
           protein F42G2.4b protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +1

Query: 625 SLVGIPEEILWKILLNLPVEDILSLCKTCNALKTMID 735
           +L+ +P ++  ++L  L V D+L+  K C  L++ +D
Sbjct: 16  TLLNLPLQVAEQVLEKLGVTDLLASRKVCRGLRSAVD 52


>AF024499-1|AAT48620.1|  941|Caenorhabditis elegans Hypothetical
           protein F42G2.4a protein.
          Length = 941

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +1

Query: 625 SLVGIPEEILWKILLNLPVEDILSLCKTCNALKTMID 735
           +L+ +P ++  ++L  L V D+L+  K C  L++ +D
Sbjct: 16  TLLNLPLQVAEQVLEKLGVTDLLASRKVCRGLRSAVD 52


>U64849-1|AAC48052.3|  936|Caenorhabditis elegans Daf-12, redundant
           with protein 1 protein.
          Length = 936

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 637 IPEEILWKILLNLPVEDILSLCKTCNALKTMIDDNCLWHELY 762
           +PEE+L K+   LP + +L+          + + + +W ELY
Sbjct: 165 LPEELLLKVFSFLPDKSLLACSSVSYRFNQISNSHEVWKELY 206


>U13875-10|AAA21159.1|  332|Caenorhabditis elegans F-box synaptic
           protein protein 1 protein.
          Length = 332

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +1

Query: 616 PSASLVGIPEEILWKILLNLPVEDILSLCKTCNALKTMI--DDNCLWHEL 759
           P  S   +P ++L +I   LP++D+ S   TC++    +  +D+ +W  L
Sbjct: 78  PEVSASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMEDSDIWQYL 127


>AF100307-11|AAC68929.1|  304|Caenorhabditis elegans Hypothetical
           protein T12B5.3 protein.
          Length = 304

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 628 LVGIPEEILWKILLNLPVEDILSLCKTCNALKTMID 735
           L+ +P  ++ +IL  L  ED+L+  K C  L+T +D
Sbjct: 4   LLDMPLALVNQILEKLDPEDLLASRKVCQKLRTAVD 39


>AF040654-1|AAK21448.1| 1236|Caenorhabditis elegans Hypothetical
           protein R06B10.1 protein.
          Length = 1236

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 22/102 (21%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
 Frame = +1

Query: 427 INAILKSLKMETHSTCLRITQYVVSSTVENVPSMFRDLKNFAHTVKNNIISPVKSSILKY 606
           +  +++++++   ST + ++   +SSTV N+P M ++LK+  + ++   I   ++++   
Sbjct: 573 VKPVIEAIQLLRKSTKVPLS---ISSTVGNLPKMKKELKDLKNFIEGKKIKTKRAAVSVM 629

Query: 607 YGYPSA----SLVGIPEEILWK----ILLNLPVEDILSLCKT 708
               +A    S++G     ++     + + L V D+ SLC T
Sbjct: 630 DQLKNASSQLSVLGSATRGIFSMNEALNMKLDVNDLKSLCST 671


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,269,513
Number of Sequences: 27780
Number of extensions: 350483
Number of successful extensions: 895
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)