Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_D18
         (716 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   1.9  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.7  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   7.6  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = +3

Query: 258 VKLPLLYYLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKI 401
           VKL  LY++S + CS      K   +R+  +  +  V P     G+ +
Sbjct: 337 VKLGSLYHISFMACSSAGCSQKVAEERHKTDINITTV-PSEQQWGILV 383


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 409 SPSILTPRGEVSGPTTITPCSAA 341
           +PS++ P    S PTT T  ++A
Sbjct: 240 APSVMYPHLNRSSPTTATAIASA 262


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 409 SPSILTPRGEVSGPTTITPCSAA 341
           +PS++ P    S PTT T  ++A
Sbjct: 188 APSVMYPHLNRSSPTTATAIASA 210


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 409 SPSILTPRGEVSGPTTITPCSAA 341
           +PS++ P    S PTT T  ++A
Sbjct: 371 APSVMYPHLNRSSPTTATAIASA 393


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 698 SFHSPWTSTWI 666
           SF+S WT  W+
Sbjct: 289 SFYSDWTRVWL 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,258
Number of Sequences: 336
Number of extensions: 3961
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)