Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_D18
         (716 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2760|AAN13821.2|  330|Drosophila melanogaster CG4390-PB...   220   1e-57
AY118729-1|AAM50589.1|  286|Drosophila melanogaster GH03475p pro...   220   2e-57
AE014297-2761|AAF55741.1|  286|Drosophila melanogaster CG4390-PA...   220   2e-57
AY051575-1|AAK92999.1|  560|Drosophila melanogaster GH22314p pro...    29   4.8  

>AE014297-2760|AAN13821.2|  330|Drosophila melanogaster CG4390-PB,
           isoform B protein.
          Length = 330

 Score =  220 bits (538), Expect = 1e-57
 Identities = 106/209 (50%), Positives = 138/209 (66%)
 Frame = +3

Query: 90  LIFPEAHQXSNMDSLQLXSSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLP 269
           ++    H  +   +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    P
Sbjct: 33  IVLSFGHIMTENMTLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCP 91

Query: 270 LLYYLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFY 449
           +L++LSGLTC+ +NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGFY
Sbjct: 92  VLFFLSGLTCTHENFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFY 151

Query: 450 LDATNEPWNNNYRMGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALVSTLRNPG 629
           +DA  EPW+ +Y+M SY+  EL D ++ A   VV P +            AL+  L+NPG
Sbjct: 152 VDAKEEPWSKHYKMYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNPG 209

Query: 630 QYKSVSAFAPICNPSACPWGVKAFXGYLG 716
            Y+SVSAFAPI NP+ CPWG KAF GYLG
Sbjct: 210 LYQSVSAFAPIANPTECPWGKKAFAGYLG 238


>AY118729-1|AAM50589.1|  286|Drosophila melanogaster GH03475p
           protein.
          Length = 286

 Score =  220 bits (537), Expect = 2e-57
 Identities = 105/196 (53%), Positives = 134/196 (68%)
 Frame = +3

Query: 129 SLQLXSSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQ 308
           +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    P+L++LSGLTC+ +
Sbjct: 2   TLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCPVLFFLSGLTCTHE 60

Query: 309 NFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYR 488
           NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGFY+DA  EPW+ +Y+
Sbjct: 61  NFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYK 120

Query: 489 MGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALVSTLRNPGQYKSVSAFAPICN 668
           M SY+  EL D ++ A   VV P +            AL+  L+NPG Y+SVSAFAPI N
Sbjct: 121 MYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNPGLYQSVSAFAPIAN 178

Query: 669 PSACPWGVKAFXGYLG 716
           P+ CPWG KAF GYLG
Sbjct: 179 PTECPWGKKAFAGYLG 194


>AE014297-2761|AAF55741.1|  286|Drosophila melanogaster CG4390-PA,
           isoform A protein.
          Length = 286

 Score =  220 bits (537), Expect = 2e-57
 Identities = 105/196 (53%), Positives = 134/196 (68%)
 Frame = +3

Query: 129 SLQLXSSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQ 308
           +L+  S+NK F G Q+VY H S  LKC M F ++LPP A  G    P+L++LSGLTC+ +
Sbjct: 2   TLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGK-PCPVLFFLSGLTCTHE 60

Query: 309 NFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYR 488
           NFI KSGFQ++AA H +IVV PDTSPRGV+I G D ++DFG  AGFY+DA  EPW+ +Y+
Sbjct: 61  NFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDFGSGAGFYVDAKEEPWSKHYK 120

Query: 489 MGSYLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALVSTLRNPGQYKSVSAFAPICN 668
           M SY+  EL D ++ A   VV P +            AL+  L+NPG Y+SVSAFAPI N
Sbjct: 121 MYSYVTQELVD-VVNANLPVV-PGKRGIFGHSMGGHGALICALKNPGLYQSVSAFAPIAN 178

Query: 669 PSACPWGVKAFXGYLG 716
           P+ CPWG KAF GYLG
Sbjct: 179 PTECPWGKKAFAGYLG 194


>AY051575-1|AAK92999.1|  560|Drosophila melanogaster GH22314p
           protein.
          Length = 560

 Score = 29.5 bits (63), Expect = 4.8
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -3

Query: 300 YKLDQTNNIEVVIS-HHPLLPEGGDR*KNSFCILVQMMHENTLFDNHQKFYWTXLI 136
           Y+  QT  + V +   HPLL  GGD  ++ +      + + + F+  +KF +  L+
Sbjct: 427 YQQQQTTQLPVQLQLQHPLLQTGGDGKQSVYAPPTVQLRKQSRFNARKKFQFAILV 482


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,813,368
Number of Sequences: 53049
Number of extensions: 700337
Number of successful extensions: 1389
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1383
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3190721655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)