Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_D18
         (716 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132847-5|CAB60384.2|  280|Caenorhabditis elegans Hypothetical ...   203   1e-52
AL110500-23|CAB63414.1|  280|Caenorhabditis elegans Hypothetical...   203   1e-52
Z49131-5|CAA88978.1|  217|Caenorhabditis elegans Hypothetical pr...    31   0.62 
Z47808-12|CAB61003.1|  902|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z47808-11|CAD36487.1|  928|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z36752-1|CAA85323.2|  150|Caenorhabditis elegans Hypothetical pr...    28   5.8  
Z35595-13|CAA84639.2|  902|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z35595-12|CAD36478.1|  928|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z35595-11|CAJ34992.1|  769|Caenorhabditis elegans Hypothetical p...    28   5.8  
AJ132947-1|CAC29085.1|  902|Caenorhabditis elegans receptor tyro...    28   5.8  
AJ132946-1|CAC29084.1|  928|Caenorhabditis elegans receptor tyro...    28   5.8  

>AL132847-5|CAB60384.2|  280|Caenorhabditis elegans Hypothetical
           protein Y48G10A.1 protein.
          Length = 280

 Score =  203 bits (495), Expect = 1e-52
 Identities = 97/193 (50%), Positives = 125/193 (64%)
 Frame = +3

Query: 138 LXSSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFI 317
           L SSN+ F G Q VY HASS  +C+M F +Y+P      D KLP L+YLSGLTC+  NF+
Sbjct: 5   LVSSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFM 62

Query: 318 TKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGS 497
            KSGFQ++A++H ++VV PDTSPRGV +DGD  SWDFG  AGFY++AT E W  NYRM  
Sbjct: 63  EKSGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYD 122

Query: 498 YLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALVSTLRNPGQYKSVSAFAPICNPSA 677
           Y+  EL + ++ +    +D  +            AL   LRN  +++S+SAFAPICNP  
Sbjct: 123 YIVKELLEEVVPSVA-PIDLAKIGIFGHSMGGHGALTIGLRNSSKFQSISAFAPICNPIT 181

Query: 678 CPWGVKAFXGYLG 716
            PWG KA  GYLG
Sbjct: 182 VPWGQKALTGYLG 194


>AL110500-23|CAB63414.1|  280|Caenorhabditis elegans Hypothetical
           protein Y48G10A.1 protein.
          Length = 280

 Score =  203 bits (495), Expect = 1e-52
 Identities = 97/193 (50%), Positives = 125/193 (64%)
 Frame = +3

Query: 138 LXSSNKIFGGYQKVYSHASSELKCKMNFSIYLPPQAEGGDVKLPLLYYLSGLTCSEQNFI 317
           L SSN+ F G Q VY HASS  +C+M F +Y+P      D KLP L+YLSGLTC+  NF+
Sbjct: 5   LVSSNRSFKGRQFVYKHASSTTQCEMTFGVYIPDHKP--DEKLPALFYLSGLTCTHANFM 62

Query: 318 TKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGS 497
            KSGFQ++A++H ++VV PDTSPRGV +DGD  SWDFG  AGFY++AT E W  NYRM  
Sbjct: 63  EKSGFQQFASKHRLVVVHPDTSPRGVDVDGDSESWDFGKGAGFYVNATVEKWAKNYRMYD 122

Query: 498 YLNVELYDLILKAFCNVVDPNRXXXXXXXXXXXXALVSTLRNPGQYKSVSAFAPICNPSA 677
           Y+  EL + ++ +    +D  +            AL   LRN  +++S+SAFAPICNP  
Sbjct: 123 YIVKELLEEVVPSVA-PIDLAKIGIFGHSMGGHGALTIGLRNSSKFQSISAFAPICNPIT 181

Query: 678 CPWGVKAFXGYLG 716
            PWG KA  GYLG
Sbjct: 182 VPWGQKALTGYLG 194


>Z49131-5|CAA88978.1|  217|Caenorhabditis elegans Hypothetical
           protein ZC373.6 protein.
          Length = 217

 Score = 31.5 bits (68), Expect = 0.62
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +3

Query: 387 RGVKIDGDDSSWDFGVSAGFYLDATNEPWNNNYRMGSYLNVELYDLILKAFCNVVDPNR 563
           +G+ I G    +   +S G+   +T +P+N N+       V++ D  +  F  V+ P R
Sbjct: 159 QGLDIHGGSGGYHRALSGGYLPPSTYDPYNVNWHSYGDEGVKMKDKAISVFRRVIAPGR 217


>Z47808-12|CAB61003.1|  902|Caenorhabditis elegans Hypothetical
           protein C01G6.8b protein.
          Length = 902

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 519 HIIQHSNNCPFCNYYSMVHLWHLNKNR 439
           H+++  +NCP   Y  MV  WH N  R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820


>Z47808-11|CAD36487.1|  928|Caenorhabditis elegans Hypothetical
           protein C01G6.8a protein.
          Length = 928

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 519 HIIQHSNNCPFCNYYSMVHLWHLNKNR 439
           H+++  +NCP   Y  MV  WH N  R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846


>Z36752-1|CAA85323.2|  150|Caenorhabditis elegans Hypothetical
           protein F35H8.1 protein.
          Length = 150

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 23/77 (29%), Positives = 34/77 (44%)
 Frame = +3

Query: 279 YLSGLTCSEQNFITKSGFQRYAAEHGVIVVGPDTSPRGVKIDGDDSSWDFGVSAGFYLDA 458
           YLS L C    FI   G +R A E   +++  +   + + +D  ++   F VS  F  D 
Sbjct: 3   YLSNLLCLTLTFIVCFGAERDADEEAYVLM--NLLKQSIDMDQTEALPGF-VSRDFTYDT 59

Query: 459 TNEPWNNNYRMGSYLNV 509
               WN +  M  YL V
Sbjct: 60  CKGIWNRDKYM-EYLKV 75


>Z35595-13|CAA84639.2|  902|Caenorhabditis elegans Hypothetical
           protein C01G6.8b protein.
          Length = 902

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 519 HIIQHSNNCPFCNYYSMVHLWHLNKNR 439
           H+++  +NCP   Y  MV  WH N  R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820


>Z35595-12|CAD36478.1|  928|Caenorhabditis elegans Hypothetical
           protein C01G6.8a protein.
          Length = 928

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 519 HIIQHSNNCPFCNYYSMVHLWHLNKNR 439
           H+++  +NCP   Y  MV  WH N  R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846


>Z35595-11|CAJ34992.1|  769|Caenorhabditis elegans Hypothetical
           protein C01G6.8c protein.
          Length = 769

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 519 HIIQHSNNCPFCNYYSMVHLWHLNKNR 439
           H+++  +NCP   Y  MV  WH N  R
Sbjct: 661 HLLECPHNCPTNIYSLMVECWHENIER 687


>AJ132947-1|CAC29085.1|  902|Caenorhabditis elegans receptor
           tyrosine kinase protein.
          Length = 902

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 519 HIIQHSNNCPFCNYYSMVHLWHLNKNR 439
           H+++  +NCP   Y  MV  WH N  R
Sbjct: 794 HLLECPHNCPTNIYSLMVECWHENIER 820


>AJ132946-1|CAC29084.1|  928|Caenorhabditis elegans receptor
           tyrosine kinase protein.
          Length = 928

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 519 HIIQHSNNCPFCNYYSMVHLWHLNKNR 439
           H+++  +NCP   Y  MV  WH N  R
Sbjct: 820 HLLECPHNCPTNIYSLMVECWHENIER 846


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,732,000
Number of Sequences: 27780
Number of extensions: 354752
Number of successful extensions: 780
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)