Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_D16
         (766 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p pro...    63   5e-10
AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl pyr...    63   5e-10
AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p pro...    63   5e-10
AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-P...    63   5e-10

>AY071445-1|AAL49067.1|  419|Drosophila melanogaster RE52884p
           protein.
          Length = 419

 Score = 62.9 bits (146), Expect = 5e-10
 Identities = 27/82 (32%), Positives = 45/82 (54%)
 Frame = +3

Query: 339 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 518
           +E + F  + P+++  +   +K         W  ++L YN+  GK  RGI TV++YK + 
Sbjct: 82  DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141

Query: 519 KPEKVTEHTLKMACKLGWCVEM 584
             + +T   +K+A  LGWCVEM
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEM 163


>AJ009963-1|CAA08919.1|  380|Drosophila melanogaster farnesyl
           pyrophosphate synthase protein.
          Length = 380

 Score = 62.9 bits (146), Expect = 5e-10
 Identities = 27/82 (32%), Positives = 45/82 (54%)
 Frame = +3

Query: 339 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 518
           +E + F  + P+++  +   +K         W  ++L YN+  GK  RGI TV++YK + 
Sbjct: 43  DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 102

Query: 519 KPEKVTEHTLKMACKLGWCVEM 584
             + +T   +K+A  LGWCVEM
Sbjct: 103 PTQDLTPENIKLAQYLGWCVEM 124


>AF132554-1|AAD27853.1|  419|Drosophila melanogaster GM06581p
           protein.
          Length = 419

 Score = 62.9 bits (146), Expect = 5e-10
 Identities = 27/82 (32%), Positives = 45/82 (54%)
 Frame = +3

Query: 339 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 518
           +E + F  + P+++  +   +K         W  ++L YN+  GK  RGI TV++YK + 
Sbjct: 82  DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141

Query: 519 KPEKVTEHTLKMACKLGWCVEM 584
             + +T   +K+A  LGWCVEM
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEM 163


>AE013599-1264|AAF58670.1|  419|Drosophila melanogaster CG12389-PA
           protein.
          Length = 419

 Score = 62.9 bits (146), Expect = 5e-10
 Identities = 27/82 (32%), Positives = 45/82 (54%)
 Frame = +3

Query: 339 NEKKMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTRGITTVISYKTIE 518
           +E + F  + P+++  +   +K         W  ++L YN+  GK  RGI TV++YK + 
Sbjct: 82  DESRDFMAVFPDLVRDITTVTKAYNCSDAAKWFAQVLQYNVPRGKKNRGILTVLTYKNLV 141

Query: 519 KPEKVTEHTLKMACKLGWCVEM 584
             + +T   +K+A  LGWCVEM
Sbjct: 142 PTQDLTPENIKLAQYLGWCVEM 163


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,882,280
Number of Sequences: 53049
Number of extensions: 707752
Number of successful extensions: 1527
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)