Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_D11
         (599 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   285   4e-77
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   285   4e-77
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   285   4e-77
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   285   4e-77
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   241   4e-64
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   241   4e-64
AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p pro...    33   0.39 
AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA...    33   0.39 
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    31   1.6  

>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  285 bits (698), Expect = 4e-77
 Identities = 138/172 (80%), Positives = 155/172 (90%)
 Frame = +1

Query: 43  SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 222
           SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 223 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 402
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 403 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 558
           RIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  285 bits (698), Expect = 4e-77
 Identities = 138/172 (80%), Positives = 155/172 (90%)
 Frame = +1

Query: 43  SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 222
           SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 223 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 402
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 403 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 558
           RIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  285 bits (698), Expect = 4e-77
 Identities = 138/172 (80%), Positives = 155/172 (90%)
 Frame = +1

Query: 43  SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 222
           SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 223 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 402
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 403 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 558
           RIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  285 bits (698), Expect = 4e-77
 Identities = 138/172 (80%), Positives = 155/172 (90%)
 Frame = +1

Query: 43  SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 222
           SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 223 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 402
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 403 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 558
           RIRVKLDGSQL+KVHLDKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  241 bits (591), Expect = 4e-64
 Identities = 118/148 (79%), Positives = 133/148 (89%)
 Frame = +1

Query: 43  SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 222
           SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 223 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 402
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 403 RIRVKLDGSQLIKVHLDKNQQTTIEHKV 486
           RIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  241 bits (591), Expect = 4e-64
 Identities = 118/148 (79%), Positives = 133/148 (89%)
 Frame = +1

Query: 43  SISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 222
           SI+QALVELE NSDLK  LR+L+IT+A+EIE  +KK++IIYVP+P+ K FQKIQI LVRE
Sbjct: 21  SIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYVPIPQQKVFQKIQIILVRE 80

Query: 223 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 402
           LEKKFSGKHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGK
Sbjct: 81  LEKKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGK 140

Query: 403 RIRVKLDGSQLIKVHLDKNQQTTIEHKV 486
           RIRVKLDGSQL+KVHLDKNQQTTIEHKV
Sbjct: 141 RIRVKLDGSQLVKVHLDKNQQTTIEHKV 168


>AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p protein.
          Length = 1394

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
 Frame = +1

Query: 43   SISQALVELETNSDLKAQLR-ELYITKAKEIELHNKKSIIIYVPMP----KLKAFQKIQI 207
            S+++ ++EL  NS L +QL  E    K  E++    +++    P P    +  AF+ +Q 
Sbjct: 1123 SVTERVLEL-ANSLLDSQLSVEQATLKPMELKTTRCRALSKTAPFPVSCDEAGAFRPLQC 1181

Query: 208  R-----LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAI--- 363
                   V     +    HV   GDR+    P     +         R++ + YD I   
Sbjct: 1182 NGRSCWCVDAAGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRNAYDTIRRE 1241

Query: 364  LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 489
            L+ L+    +   R++   DGS +++  L    +  +   ++
Sbjct: 1242 LQQLLGGESVENLRVQENFDGSAIVRFELHNEAKVDLAFAIE 1283


>AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA
            protein.
          Length = 1511

 Score = 32.7 bits (71), Expect = 0.39
 Identities = 34/162 (20%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
 Frame = +1

Query: 43   SISQALVELETNSDLKAQLR-ELYITKAKEIELHNKKSIIIYVPMP----KLKAFQKIQI 207
            S+++ ++EL  NS L +QL  E    K  E++    +++    P P    +  AF+ +Q 
Sbjct: 1240 SVTERVLEL-ANSLLDSQLSVEQATLKPMELKTTRCRALSKTAPFPVSCDEAGAFRPLQC 1298

Query: 208  R-----LVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAI--- 363
                   V     +    HV   GDR+    P     +         R++ + YD I   
Sbjct: 1299 NGRSCWCVDAAGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRNAYDTIRRE 1358

Query: 364  LEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 489
            L+ L+    +   R++   DGS +++  L    +  +   ++
Sbjct: 1359 LQQLLGGESVENLRVQENFDGSAIVRFELHNEAKVDLAFAIE 1400


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/66 (27%), Positives = 36/66 (54%)
 Frame = +1

Query: 142 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 321
           NKK  ++   + KL  +++    +  + + K   KH+  V + K  PK + KT+ + K+K
Sbjct: 567 NKK--LLNSSVVKLSLYEQNPRMVPSKFQPKCEEKHMEPVAEEKPKPKSAAKTKESRKRK 624

Query: 322 RPRSRT 339
           +P ++T
Sbjct: 625 QPVAQT 630


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,781,252
Number of Sequences: 53049
Number of extensions: 554904
Number of successful extensions: 1438
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1438
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)