Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_D05
         (769 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    25   0.59 
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    24   1.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    24   1.8  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    23   2.4  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    23   2.4  
EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholi...    21   9.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   9.5  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    PK  PG+NR I +   PQ RP
Sbjct: 55  PPHPRLRREAEPKAEPGNNRPIYI---PQPRP 83


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 398 VDLQETIPLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           V + +  P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 103 VYISQPRPPHPRLRREAEPEAEPGNNRPVYI---PQPRP 138



 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 398 VDLQETIPLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           V + +  P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 159 VYISQPRPPHPRLRREAEPEAEPGNNRPVYI---PQPRP 194



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 54  PPHPRLRREAEPEAEPGNNRPVYI---PQPRP 82



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 194 PPHPRLRREAEPEAEPGNNRPVYI---PQPRP 222



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 222 PPHPRLRREAEPEAEPGNNRPVYI---PQPRP 250


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = +1

Query: 286 GRVRKNCDRCQPRPKELHSDKGSKHSTRTSSPHTFAVRGSTG 411
           G V +    C P+   +   K S H  +   PH  AV  +TG
Sbjct: 142 GLVNRTVPVCAPK-LHVFDLKTSNHLKQIEIPHDIAVNATTG 182


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 55  PPHPRLRREAEPEAEPGNNRPVYI---PQPRP 83



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 83  PPHPRLRREAEPEAEPGNNRPVYI---PQPRP 111



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 111 PPHPRLRREAEPEAEPGNNRPVYI---PQPRP 139


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 26  PPHPRLRREAEPEAEPGNNRPVYI---PQPRP 54



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 54  PPHPRLRREAEPEAEPGNNRPVYI---PQPRP 82



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 82  PPHPRLRREAEPEAEPGNNRPVYI---PQPRP 110



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 110 PPHPRLRREAEPEAEPGNNRPVYI---PQPRP 138



 Score = 23.4 bits (48), Expect = 2.4
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +2

Query: 419 PLEPTVKSLFHPKLAPGDNRQILLEITPQNRP 514
           P  P ++    P+  PG+NR + +   PQ RP
Sbjct: 166 PPHPRLRREAEPEAEPGNNRPVYI---PQPRP 194


>EF127802-1|ABL67939.1|  461|Apis mellifera nicotinic acetylcholine
           receptor subunitalpha 6 transcript variant 3 protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = +3

Query: 606 SFLYVFSGIFGST 644
           S LYV  GIFGST
Sbjct: 98  SCLYVPPGIFGST 110


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 346 KGSKHSTRTSSPHTFAVRGSTGDHSI 423
           K SK   +   PH  A+  +TG  ++
Sbjct: 160 KNSKLLKQVKIPHDIAINSTTGKRNV 185


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,222
Number of Sequences: 438
Number of extensions: 5973
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)