Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_D04
         (696 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    27   0.19 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    27   0.19 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    27   0.19 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   3.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.3  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.6  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   9.6  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 381 FELADNLVNGYRDDTRFRDFQNLEKIFGSDRDIL 482
           F L +N + G R + R +  QN  K+FG+D   L
Sbjct: 78  FRLLENKL-GVRQENRVKYNQNYSKVFGNDEKAL 110


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 381 FELADNLVNGYRDDTRFRDFQNLEKIFGSDRDIL 482
           F L +N + G R + R +  QN  K+FG+D   L
Sbjct: 138 FRLLENKL-GVRQENRVKYNQNYSKVFGNDEKAL 170


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 381 FELADNLVNGYRDDTRFRDFQNLEKIFGSDRDIL 482
           F L +N + G R + R +  QN  K+FG+D   L
Sbjct: 138 FRLLENKL-GVRQENRVKYNQNYSKVFGNDEKAL 170


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -1

Query: 135 FHCYYLCTVINGYFVKFKFENRIIYR 58
           FHC++L  ++ G  +      ++IYR
Sbjct: 669 FHCHFLFHIVIGMNLIIHVGTQLIYR 694


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 235 NILNYLEFQMTLLSR*QESFCFVFHF 312
           N+LN  + ++ L    Q +  F++HF
Sbjct: 81  NLLNPEDVELVLTDTKQNTKSFIYHF 106


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 235 NILNYLEFQMTLLSR*QESFCFVFHF 312
           N+LN  + ++ L    Q +  F++HF
Sbjct: 81  NLLNPEDVELVLTDTKQNTKSFIYHF 106


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 84  KFENRIIYRMRERTMSRSIAGRLVIGR 4
           K   R  YR RER ++R I    ++ R
Sbjct: 557 KQTERRFYRHRERLVARGIHAEALVPR 583


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/36 (27%), Positives = 14/36 (38%)
 Frame = -1

Query: 204 YFKITKKANVFLNTMPKIYGKKRFHCYYLCTVINGY 97
           YF  T     F   + KI  +  F C +L  +   Y
Sbjct: 60  YFGTTTNLKRFYKVVEKILTQSSFECIHLSVLHKCY 95


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,399
Number of Sequences: 336
Number of extensions: 3138
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)