Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_D02
         (550 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    24   0.76 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   3.1  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   4.1  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   4.1  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    22   4.1  

>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 403 PFGFARMTARQRGDTRDHQPPRDG 474
           P+G  R+ +    D  D  PP+DG
Sbjct: 335 PYGTTRLMSSFAFDNNDQGPPQDG 358


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -2

Query: 102 RHANRRPSTLSTPSYGATEAAAASSDRDALIGR 4
           R    RP  ++TP +G   A++A++      GR
Sbjct: 41  RRRAARPGVVTTPRWGCARASSATTMGGPRYGR 73


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +1

Query: 202 KASTSEKEARGSWPRRDDLKIEFGFGMPLGAMSAHPAFHSAWDIACPSSG 351
           K  T +  AR  W ++   K +   GMP    S      + +DI  P+SG
Sbjct: 735 KKLTVDFSAR-EWVKQGAPKEKLMIGMPTYGRSFELVNKTQFDIGAPASG 783


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 403 PFGFARMTARQRGDTRDHQPPRD 471
           P+G  R+ +    D  D  PP+D
Sbjct: 334 PYGTTRLMSSFAFDNNDQGPPQD 356


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +1

Query: 403 PFGFARMTARQRGDTRDHQPPRD 471
           P+G  R+ +    D  D  PP+D
Sbjct: 335 PYGTTRLMSSFAFDNNDQGPPQD 357


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 227 ASFSLVEAFRSFIIFE**TRPFKEKKYEK 141
           A F  V    SF+ +E  T P  +KK +K
Sbjct: 279 AGFETVSTGVSFMAYELATNPHVQKKLQK 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,898
Number of Sequences: 336
Number of extensions: 1861
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)