Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_D02
         (550 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1325 - 26146775-26147247,26147397-26148579                       30   1.4  
12_02_0841 + 23579344-23579394,23579522-23579584,23579717-235798...    29   1.8  
10_08_0874 - 21205506-21205685,21205825-21205998,21206114-212062...    29   3.2  

>08_02_1325 - 26146775-26147247,26147397-26148579
          Length = 551

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
 Frame = -3

Query: 293 APRGI--PNPNSILRSSLLGQEPRAS 222
           AP G+  P+PNS+LR+  +GQ+P  S
Sbjct: 230 APNGVVTPSPNSLLRTEQVGQDPVVS 255


>12_02_0841 +
           23579344-23579394,23579522-23579584,23579717-23579826,
           23580220-23580320,23580816-23580877,23580972-23581112,
           23581388-23581523,23582257-23582284,23582665-23582728,
           23582924-23583044,23583565-23583623,23583716-23583784,
           23583875-23584015,23584130-23584194,23584345-23584441,
           23584803-23584862,23585409-23585561,23586022-23586088,
           23586174-23586284,23586689-23586799,23587370-23587567,
           23587679-23587860
          Length = 729

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 454 HQPPRDGLQTERPDTRKERAXNHSNT 531
           H+PPRDG  T+R ++ + RA    +T
Sbjct: 654 HRPPRDGQPTKRKNSERGRAQEEDDT 679


>10_08_0874 -
           21205506-21205685,21205825-21205998,21206114-21206249,
           21206622-21206794,21207612-21207839
          Length = 296

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +1

Query: 184 KMMNDLKASTSEKEARGSWPRR 249
           +MM D+KA  S+ EARG WP+R
Sbjct: 208 EMMEDVKAFHSKMEARG-WPKR 228


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,723,713
Number of Sequences: 37544
Number of extensions: 245710
Number of successful extensions: 713
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 713
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)