Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_C24
(844 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 86 3e-17
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 86 3e-17
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 79 5e-15
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 79 5e-15
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 78 7e-15
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 33 0.25
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 31 0.78
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 30 1.8
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 30 1.8
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 30 1.8
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 30 1.8
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 29 3.1
U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine rece... 29 4.1
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 29 4.1
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 29 5.5
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 85.8 bits (203), Expect = 3e-17
Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Frame = +1
Query: 133 NFDEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 312
NFDE+MK IGVGLITRKAA + P +E+R DG+ +N STFK T++ FK GEEF E+
Sbjct: 18 NFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTKLSFKLGEEFVENS 77
Query: 313 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMT--AKDVTCTRVYK 480
D S+ TFE L Q + V E K + T + DV C R ++
Sbjct: 78 PDDRTYNSLFTFENGKLTHRQNKIKENHKSSVLTTWLENGKLIQTYQSGDVICRREWE 135
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 85.8 bits (203), Expect = 3e-17
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = +1
Query: 133 NFDEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 312
NF+E+MK +GVGLITRKAA + PT+E++ +GD + STFK T + FK G+EF+E
Sbjct: 16 NFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFKLGQEFDETT 75
Query: 313 ADGAKVKSVCTFEGNTLKQVQK 378
DG VKSV FE +QK
Sbjct: 76 PDGRTVKSVVNFENGKFIHIQK 97
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 78.6 bits (185), Expect = 5e-15
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 133 NFDEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 312
NFDE++K +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 18 NFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKT 77
Query: 313 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 480
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 78 ADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 134
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 78.6 bits (185), Expect = 5e-15
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 133 NFDEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 312
NFDE++K +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 33 NFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKT 92
Query: 313 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 480
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 93 ADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 149
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 78.2 bits (184), Expect = 7e-15
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Frame = +1
Query: 133 NFDEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 312
NF++++K +GVGL+ RKAA A PT+E++ +G+++++ STFK T ++F G EF+E
Sbjct: 17 NFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTLEFTLGVEFDETT 76
Query: 313 ADGAKVKSVCTFEGNTLKQVQK--APDGLEVTYVREFGPEEMKAVMTAKDVTCTRVY 477
DG + KS T E + VQK + R F E++ + + V R Y
Sbjct: 77 PDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITTLQSGSVISRRAY 133
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +1
Query: 133 NFDEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 312
NF+E++K IGVGL+ RKAA+ +PT+E++ DGD ++ STFK ++ FK E+F E
Sbjct: 18 NFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNKLAFKIREKFVEIA 77
Query: 313 ADGAKVKSVCTFE 351
D ++ TFE
Sbjct: 78 PDERSYNTLVTFE 90
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 33.1 bits (72), Expect = 0.25
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 7/123 (5%)
Frame = +1
Query: 133 NFDEFMKXIGVGLITRKAAN--AVTPTVELRKDGDEYNLVTSSTFKTTEMK-FKPGEEFE 303
NFDEF+ GV R+ +T + ++ +YN+ ++ K T + ++ G++FE
Sbjct: 18 NFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLTSKKNTNYQAWELGKKFE 77
Query: 304 EDRADGAKVKSVCTFEGNTLKQVQ---KAPDGLEVTYVREFGPEEMKAV-MTAKDVTCTR 471
DG + + F+ L + P+ TY + + M + C R
Sbjct: 78 APGLDGNQHEITFDFKDEILSEHHIRLNEPETSAETYFYTIDDQNQLVMRMENNGIVCRR 137
Query: 472 VYK 480
+K
Sbjct: 138 WFK 140
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 31.5 bits (68), Expect = 0.78
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 6/122 (4%)
Frame = +1
Query: 133 NFDEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP---GEEFE 303
NFDE++ G G TRK T K ++ S+ ++ +K G+ F+
Sbjct: 35 NFDEYLTAKGYGWFTRKLVTFATFKKVFTKTSNKNLFDYSNLTSKKDVHYKNVQLGKAFQ 94
Query: 304 EDRADGAKVKSVCTFEGNTLKQVQK---APDGLEVTYVREFGPEEMKAVMTAKDVTCTRV 474
+ D K + T + L + K D E TY F E + M+ V R
Sbjct: 95 GEGLDSTKHEITFTLKDGHLFEHHKPLEGGDAKEETYEYLFDKEFLLVRMSFNGVEGRRF 154
Query: 475 YK 480
YK
Sbjct: 155 YK 156
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 30.3 bits (65), Expect = 1.8
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Frame = +1
Query: 133 NFDEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKF----KPGEEF 300
NFDE++ G G TRK T K+ ++ NL S + + F + G +F
Sbjct: 37 NFDEYLTAKGYGWFTRKLVTFATFKKVFAKNANK-NLFDYSNLTSKKDVFYKNVQIGSKF 95
Query: 301 EEDRADGAKVKSVCTF-EGNTLKQVQKAPDG--LEVTYVREFGPEEMKAVMTAKDVTCTR 471
E + D K + T +G+ + + +G E TY F + + M+ ++ R
Sbjct: 96 EGEGLDNTKHEVTFTLKDGHLFEHHKPLEEGESKEETYEYYFDGDFLIQKMSFNNIEGRR 155
Query: 472 VYK 480
YK
Sbjct: 156 FYK 158
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 139 DEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 288
++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 7 NKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 139 DEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 288
++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 7 NKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +1
Query: 139 DEFMKXIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 288
++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 7 NKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 30.3 bits (65), Expect = 1.8
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 622 ISHRLPFELQKRVAVTLN*NKFSDHGN--NSGALVREAIIVFKNT 750
I++++P LQK LN DH N N+G L++ AI +FK T
Sbjct: 232 IANKIPNMLQKFKTPFLNILAVGDHRNKGNTGKLLQSAITLFKKT 276
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +1
Query: 289 GEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCT 468
G E DGA++ +C N KQ+ K+P E + +++K++ A+ +
Sbjct: 433 GATGEHSPCDGAELDHLCENFLNIDKQILKSPSKEEQLEIATVTEQDLKSLKLAEKLD-- 490
Query: 469 RVYKVQ*GLYSEVGSRC-----RRFTNIPRHNYVYL 561
+++ G+ SE+ RC + F ++ H+ V+L
Sbjct: 491 --FEIVDGMESEI-ERCYEAHTKSFNDLHMHSMVFL 523
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 29.5 bits (63), Expect = 3.1
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +1
Query: 289 GEEFEEDRADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMTAKDVTCT 468
G E DGA++ +C N KQ+ K+P E + +++K++ A+ +
Sbjct: 433 GATGEHSPCDGAELDHLCENFLNIDKQILKSPSKEEQLEIATVTEQDLKSLKLAEKLD-- 490
Query: 469 RVYKVQ*GLYSEVGSRC-----RRFTNIPRHNYVYL 561
+++ G+ SE+ RC + F ++ H+ V+L
Sbjct: 491 --FEIVDGMESEI-ERCYEAHTKSFNDLHMHSMVFL 523
>U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform c protein.
Length = 299
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 521 ADSRTSRGTIMFI*HLFYTLALSSFFVKLILVFTSVIVYRSNC 649
ADS + G I+F HLF+ + S F L+ + T + V +C
Sbjct: 51 ADSLHNYGQIIFTAHLFFDIQTSHFVCTLLNIPTLIGVISGSC 93
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 178 RKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE 306
+ A + TP D+ + T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 174 DQTHADGLHELIKVTRRKSXCIXCLRIP 91
D+ D L ELIK+ R+KS CL +P
Sbjct: 242 DKGQDDKLEELIKIERQKSRSNQCLSLP 269
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,414,572
Number of Sequences: 27780
Number of extensions: 336879
Number of successful extensions: 778
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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