Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_C21
         (801 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam ...    31   0.96 
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z38112-6|CAA86235.2|  870|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z35637-7|CAA84690.2|  870|Caenorhabditis elegans Hypothetical pr...    28   6.8  
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.     28   6.8  
AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical ...    28   6.8  
U39744-1|AAK18882.1|  471|Caenorhabditis elegans Hypothetical pr...    28   8.9  

>U42830-4|AAC48277.1|  487|Caenorhabditis elegans Neuronal igcam
           protein 3 protein.
          Length = 487

 Score = 31.1 bits (67), Expect = 0.96
 Identities = 23/88 (26%), Positives = 39/88 (44%)
 Frame = +1

Query: 301 DISVRYIQLKEXDFELHYKVLDTIFQNLHKKMKEIDPYYXXYSSTVHHAGSHYDNVRIXK 480
           D+++    L E  FE    V  T+  N H +   I          V H   ++ +  I  
Sbjct: 238 DVNIEVYTLPE--FETEESVQYTVIDN-HVRDAIIYCNVTHSFPPVRHYTFYHGDEEIKM 294

Query: 481 PDEFDMVIEIGVPLCFHEKTNNRNESDI 564
            D+F++ + +GV    H K +N NE+D+
Sbjct: 295 SDKFNIFVNVGVSQGAHLKIHNVNENDL 322


>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
            E03A3.6 protein.
          Length = 2089

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -3

Query: 595  EHSRHVWVQ----ILYRSRFDYL 539
            +H+RH+W+Q    ILY+ RFD L
Sbjct: 1353 QHTRHLWLQSLILILYKYRFDQL 1375


>Z38112-6|CAA86235.2|  870|Caenorhabditis elegans Hypothetical
           protein E03A3.6b protein.
          Length = 870

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -3

Query: 595 EHSRHVWVQ----ILYRSRFDYL 539
           +H+RH+W+Q    ILY+ RFD L
Sbjct: 134 QHTRHLWLQSLILILYKYRFDQL 156


>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
            E03A3.6 protein.
          Length = 2089

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -3

Query: 595  EHSRHVWVQ----ILYRSRFDYL 539
            +H+RH+W+Q    ILY+ RFD L
Sbjct: 1353 QHTRHLWLQSLILILYKYRFDQL 1375


>Z35637-7|CAA84690.2|  870|Caenorhabditis elegans Hypothetical
           protein E03A3.6b protein.
          Length = 870

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -3

Query: 595 EHSRHVWVQ----ILYRSRFDYL 539
           +H+RH+W+Q    ILY+ RFD L
Sbjct: 134 QHTRHLWLQSLILILYKYRFDQL 156


>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
          Length = 2084

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
 Frame = -3

Query: 595  EHSRHVWVQ----ILYRSRFDYL 539
            +H+RH+W+Q    ILY+ RFD L
Sbjct: 1356 QHTRHLWLQSLILILYKYRFDQL 1378


>AF025465-9|AAB71020.2|  136|Caenorhabditis elegans Hypothetical
           protein K02E7.11 protein.
          Length = 136

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
 Frame = -1

Query: 573 FKFYIALVS-IICFLVEAKR----HTYFDNHVEFIGFXYTHIVVVTPGMMYRARISXVVW 409
           F ++I+ +S +IC L + KR    H YF++ + FI F    I++V+  M+         +
Sbjct: 61  FLWFISSISALICVLQDQKRYLRFHIYFNSVITFIYFCKLIILLVSINMVTSILCIVCNF 120

Query: 408 INF 400
           +NF
Sbjct: 121 VNF 123


>U39744-1|AAK18882.1|  471|Caenorhabditis elegans Hypothetical
           protein C03F11.1 protein.
          Length = 471

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -1

Query: 681 FPQISSFVDLPIDSVPHR*VLELRAHFQLNIAGMSGFKFYIALVSIICFLVEAK 520
           F + +S   +PIDS   + V  +R+    N   ++    Y+AL  +I  LVE++
Sbjct: 41  FQRNNSRYGVPIDSTAVKQVYRVRSERLTNRVRITDRSLYLALFGVILMLVESE 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,000,714
Number of Sequences: 27780
Number of extensions: 346040
Number of successful extensions: 894
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)