Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_C20
         (517 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89...    32   0.24 
07_01_0349 + 2521006-2522439                                           28   5.1  

>08_01_0113 +
           897970-898038,898148-898271,898811-898896,898996-899049
          Length = 110

 Score = 32.3 bits (70), Expect = 0.24
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +3

Query: 84  KAAAVSVSPYWPGLFAKAL 140
           KAA + V  YWPGLFAK L
Sbjct: 32  KAANIKVEAYWPGLFAKLL 50


>07_01_0349 + 2521006-2522439
          Length = 477

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 149 MPSQGFGEQTWPIWR 105
           +P+ G  E+TWP+WR
Sbjct: 70  VPTDGDQEETWPVWR 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,488,889
Number of Sequences: 37544
Number of extensions: 133209
Number of successful extensions: 325
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)