Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_C13
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 378 e-105
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 378 e-105
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 369 e-102
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 364 e-101
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 288 3e-78
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 280 8e-76
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 240 1e-63
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 236 1e-62
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 149 3e-36
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.46
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.46
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 32 0.46
AF077546-7|AAC26319.1| 534|Caenorhabditis elegans Hypothetical ... 32 0.46
U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine rece... 30 2.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.2
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 28 7.4
U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydr... 28 7.4
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 7.4
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 9.8
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 9.8
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 378 bits (929), Expect = e-105
Identities = 172/238 (72%), Positives = 201/238 (84%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 326
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 327 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 506
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 507 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 686
MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185
Query: 687 QRVHTVXVSLQHSEKITLXTLRDEIRXKVIKEVIPAQYLDXRTVIHINPCGLFIIGGP 860
RVHTV +S QHS I+L LR E+ KVIK VIPA +D +T+ H+NPCG FIIGGP
Sbjct: 186 LRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGGP 243
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 378 bits (929), Expect = e-105
Identities = 172/238 (72%), Positives = 201/238 (84%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 326
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 327 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 506
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 507 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 686
MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185
Query: 687 QRVHTVXVSLQHSEKITLXTLRDEIRXKVIKEVIPAQYLDXRTVIHINPCGLFIIGGP 860
RVHTV +S QHS I+L LR E+ KVIK VIPA +D +T+ H+NPCG FIIGGP
Sbjct: 186 LRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGGP 243
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 369 bits (909), Expect = e-102
Identities = 170/238 (71%), Positives = 197/238 (82%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 326
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 327 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 506
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 507 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 686
MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVP 185
Query: 687 QRVHTVXVSLQHSEKITLXTLRDEIRXKVIKEVIPAQYLDXRTVIHINPCGLFIIGGP 860
RVHTV +S QHS I+L LR E+ KVIK VIP +D TV H+NPCG F++GGP
Sbjct: 186 LRVHTVVISTQHSPDISLEDLRKELIEKVIKVVIPGNLIDNDTVYHLNPCGSFVVGGP 243
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 364 bits (896), Expect = e-101
Identities = 168/240 (70%), Positives = 198/240 (82%)
Frame = +3
Query: 141 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 320
S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET+TKTGMV+LCGEITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 321 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQ 500
VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E+VGAGDQ
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122
Query: 501 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGAT 680
G+MFGYATDETEE MPLT++L+HK+N ++ +LRRNG W RPDSK+QVT EY GAT
Sbjct: 123 GIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGAT 182
Query: 681 VPQRVHTVXVSLQHSEKITLXTLRDEIRXKVIKEVIPAQYLDXRTVIHINPCGLFIIGGP 860
+P RVHTV VS QHS +TL LR+ I VIK+VIPA LD TV HINPCG FI+GGP
Sbjct: 183 IPLRVHTVVVSTQHSPDVTLEKLRETILADVIKKVIPASLLDESTVFHINPCGTFIVGGP 242
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 288 bits (707), Expect = 3e-78
Identities = 131/192 (68%), Positives = 158/192 (82%)
Frame = +3
Query: 285 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 464
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 465 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQ 644
+++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQ
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQ 120
Query: 645 VTCEYVFAGGATVPQRVHTVXVSLQHSEKITLXTLRDEIRXKVIKEVIPAQYLDXRTVIH 824
VT EY GGA VP RVHTV +S QHS I+L LR E+ KVIK VIPA +D +T+ H
Sbjct: 121 VTIEYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYH 180
Query: 825 INPCGLFIIGGP 860
+NPCG FIIGGP
Sbjct: 181 LNPCGSFIIGGP 192
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 280 bits (687), Expect = 8e-76
Identities = 129/192 (67%), Positives = 154/192 (80%)
Frame = +3
Query: 285 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 464
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 465 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQ 644
+++ +VGAGDQG+MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE W RPDSKTQ
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQ 120
Query: 645 VTCEYVFAGGATVPQRVHTVXVSLQHSEKITLXTLRDEIRXKVIKEVIPAQYLDXRTVIH 824
VT EY GGA VP RVHTV +S QHS I+L LR E+ KVIK VIP +D TV H
Sbjct: 121 VTIEYSSEGGACVPLRVHTVVISTQHSPDISLEDLRKELIEKVIKVVIPGNLIDNDTVYH 180
Query: 825 INPCGLFIIGGP 860
+NPCG F++GGP
Sbjct: 181 LNPCGSFVVGGP 192
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 240 bits (587), Expect = 1e-63
Identities = 108/165 (65%), Positives = 132/165 (80%)
Frame = +3
Query: 366 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECM 545
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 546 PLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVXVSLQHS 725
PLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTV +S QHS
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVISTQHS 139
Query: 726 EKITLXTLRDEIRXKVIKEVIPAQYLDXRTVIHINPCGLFIIGGP 860
I+L LR E+ KVIK VIPA +D +T+ H+NPCG FIIGGP
Sbjct: 140 PDISLDDLRKELIVKVIKAVIPANLIDDKTIYHLNPCGSFIIGGP 184
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 236 bits (578), Expect = 1e-62
Identities = 108/170 (63%), Positives = 134/170 (78%), Gaps = 3/170 (1%)
Frame = +3
Query: 360 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 530
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 531 TEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVXV 710
TEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTV +
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVI 152
Query: 711 SLQHSEKITLXTLRDEIRXKVIKEVIPAQYLDXRTVIHINPCGLFIIGGP 860
S QHS I+L LR E+ KVIK VIPA +D +T+ H+NPCG FIIGGP
Sbjct: 153 STQHSPDISLDDLRKELIVKVIKAVIPANLIDDKTIYHLNPCGSFIIGGP 202
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/86 (54%), Positives = 53/86 (61%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 326
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC KT VL+ E S
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIA 65
Query: 327 DYQKVVRETVKHIGYDDSSKGFDYKT 404
V +++ +G D F Y T
Sbjct: 66 AGVHVDKDS-DDVGAGDQGIMFGYAT 90
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 149 bits (360), Expect = 3e-36
Identities = 67/81 (82%), Positives = 73/81 (90%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 326
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 327 DYQKVVRETVKHIGYDDSSKG 389
DYQ +VR +K IGYDDSSKG
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +1
Query: 325 WIIKKLCAKRSNILVMMIRPKAL----ITRHAV*CSH*TNNHQTLLLGCMRTEMTRKLGQ 492
W+I LC + S+ L ++I+ ITRHA+ H NNH LL T +
Sbjct: 97 WLIT-LC-QESHFLGLLIKYSIQFQDSITRHAMFLLHSNNNHLKSLLESTWTRIVTMSEP 154
Query: 493 ETRA*CSVMQQMRQKNAC 546
E + C M M+ K C
Sbjct: 155 EIKELCLDMLLMKPKKRC 172
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 263
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3
Query: 147 FLFTSESVGEGHPDKMCDQ 203
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 213 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 353
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 213 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 353
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +3
Query: 213 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 353
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF077546-7|AAC26319.1| 534|Caenorhabditis elegans Hypothetical
protein T08E11.8 protein.
Length = 534
Score = 32.3 bits (70), Expect = 0.46
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +3
Query: 609 EFWWARPDSKTQVTCEYVFAGGATVP-QRVHTVXVSLQHSEKITLXTLRDEIRXKVIKEV 785
E W D ++ +Y+F GA +P ++++ SL+ +E++ L L + + K I E+
Sbjct: 334 EDWKLSEDQFVEIFNKYIFLRGALIPVEKLNITTSSLKRAEQV-LQNL-NPVAIKTI-EI 390
Query: 786 IPAQYLDXRTVIHI 827
P ++ RT+ HI
Sbjct: 391 QPTPWVTSRTIGHI 404
>U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein220 protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 640 HRLLANMYLLVVQQSHREFILXSC 711
H L++ + +LVVQ+ +REFI SC
Sbjct: 287 HGLVSTLVMLVVQKPYREFISKSC 310
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +3
Query: 369 YDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE-TEECM 545
+DD+S+ + T + DQQ N + ++GA GL +++ T++
Sbjct: 225 HDDNSQPIEILTRILSKTSDQQWENFIGLLETIEKSTDIGASISGLRVSCSSNVLTKDSE 284
Query: 546 PLTVVLAHKLNQKIAELRRN 605
T V+ KLN++ E RN
Sbjct: 285 TQTDVVQRKLNKERREPSRN 304
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 267 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 446
T+T+TG L + + ++++ K + D ++K D KTC L +DQ N+
Sbjct: 37 TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96
Query: 447 AAGV 458
+
Sbjct: 97 PISI 100
>U41539-1|AAB52498.1| 246|Caenorhabditis elegans Carbonic anhydrase
protein 3 protein.
Length = 246
Score = 28.3 bits (60), Expect = 7.4
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Frame = +3
Query: 540 CMPLTVVLAHKLNQKIAE-LRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVXVSL 716
C P TV N +++E L N +W S T C + V + T V++
Sbjct: 155 CNPETVTRVE--NVRLSEKLPANKRSFWRYEGSLTTPPCSEI------VTWTIFTEPVTV 206
Query: 717 QHSEKITLXTLRDEIRXKVIKEVIPAQYLDXRTVIHI 827
H + ++D + + K P Q L+ R ++HI
Sbjct: 207 THDQLELFRQVQDIEKRPIKKNYRPTQNLNDRKIVHI 243
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +1
Query: 313 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 405
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 386 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 264
FGR D NF H FG HH GF +GF
Sbjct: 149 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 386 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 264
FGR D NF H FG HH GF +GF
Sbjct: 223 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,358,240
Number of Sequences: 27780
Number of extensions: 488824
Number of successful extensions: 1331
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1331
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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