Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_C10
         (676 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1832|AAF50148.1|  127|Drosophila melanogaster CG8009-PA...   169   2e-42
AY069435-1|AAL39580.1|  131|Drosophila melanogaster LD14173p pro...   163   1e-40
AE014296-1831|AAN11906.1|  131|Drosophila melanogaster CG8009-PB...   163   1e-40
AE014298-3223|EAL24566.1|  123|Drosophila melanogaster CG41106-P...    74   2e-13

>AE014296-1832|AAF50148.1|  127|Drosophila melanogaster CG8009-PA,
           isoform A protein.
          Length = 127

 Score =  169 bits (412), Expect = 2e-42
 Identities = 74/118 (62%), Positives = 98/118 (83%)
 Frame = +1

Query: 259 DLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 438
           DLKAFERRLTEV++  +P+T RWRI+L+ +S+CTAI+A++WL DP T VV LT+SLW HP
Sbjct: 8   DLKAFERRLTEVVSSYRPSTFRWRIVLSAMSMCTAISAWYWLRDPRTTVVPLTESLWIHP 67

Query: 439 FFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRPANSS 612
            F V +  LV+LF++G+ + V+AP IIT+RTR +L DFNMSCDDTGKLILKPR +N++
Sbjct: 68  VFTVATLTLVVLFILGIQKLVIAPQIITSRTRMVLGDFNMSCDDTGKLILKPRQSNNN 125


>AY069435-1|AAL39580.1|  131|Drosophila melanogaster LD14173p
           protein.
          Length = 131

 Score =  163 bits (397), Expect = 1e-40
 Identities = 75/122 (61%), Positives = 97/122 (79%), Gaps = 4/122 (3%)
 Frame = +1

Query: 259 DLKAFERRLTEVIACLQPATMRWRILLTIV----SVCTAIAAYHWLMDPLTPVVSLTQSL 426
           DLKAFERRLTEV++  +P+T RWR LL +V    S+CTAI+A++WL DP T VV LT+SL
Sbjct: 8   DLKAFERRLTEVVSSYRPSTFRWRKLLAVVLSAMSMCTAISAWYWLRDPRTTVVPLTESL 67

Query: 427 WNHPFFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRPAN 606
           W HP F V +  LV+LF++G+ + V+AP IIT+RTR +L DFNMSCDDTGKLILKPR +N
Sbjct: 68  WIHPVFTVATLTLVVLFILGIQKLVIAPQIITSRTRMVLGDFNMSCDDTGKLILKPRQSN 127

Query: 607 SS 612
           ++
Sbjct: 128 NN 129


>AE014296-1831|AAN11906.1|  131|Drosophila melanogaster CG8009-PB,
           isoform B protein.
          Length = 131

 Score =  163 bits (397), Expect = 1e-40
 Identities = 75/122 (61%), Positives = 97/122 (79%), Gaps = 4/122 (3%)
 Frame = +1

Query: 259 DLKAFERRLTEVIACLQPATMRWRILLTIV----SVCTAIAAYHWLMDPLTPVVSLTQSL 426
           DLKAFERRLTEV++  +P+T RWR LL +V    S+CTAI+A++WL DP T VV LT+SL
Sbjct: 8   DLKAFERRLTEVVSSYRPSTFRWRKLLAVVLSAMSMCTAISAWYWLRDPRTTVVPLTESL 67

Query: 427 WNHPFFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRPAN 606
           W HP F V +  LV+LF++G+ + V+AP IIT+RTR +L DFNMSCDDTGKLILKPR +N
Sbjct: 68  WIHPVFTVATLTLVVLFILGIQKLVIAPQIITSRTRMVLGDFNMSCDDTGKLILKPRQSN 127

Query: 607 SS 612
           ++
Sbjct: 128 NN 129


>AE014298-3223|EAL24566.1|  123|Drosophila melanogaster CG41106-PA
           protein.
          Length = 123

 Score = 74.1 bits (174), Expect = 2e-13
 Identities = 39/113 (34%), Positives = 61/113 (53%)
 Frame = +1

Query: 259 DLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHP 438
           DL AFERRL EV+   + +++RWR +L  +  C+AI+A HW+ D       + Q L +  
Sbjct: 8   DLLAFERRLAEVVNTEKRSSLRWRFVLGAIFACSAISACHWVRDAKESESVVFQILSSQS 67

Query: 439 FFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPR 597
            FA +   + LL   G +        I   T+ +L+ F ++ D+ G+LIL PR
Sbjct: 68  AFAFSLATICLLIFYGFNHATKQDPSILRDTQEMLSPFRLNIDNQGRLILLPR 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,074,877
Number of Sequences: 53049
Number of extensions: 473099
Number of successful extensions: 1066
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)