Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_B18
(608 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1599 - 28022196-28022218,28022355-28022408,28022545-280226... 176 1e-44
03_02_1006 + 13150394-13150450,13150787-13150899,13152538-131527... 176 1e-44
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 165 3e-41
03_02_0185 - 6239421-6239480,6239971-6240024,6240523-6240578,624... 131 5e-31
04_04_0863 + 28847761-28848009,28848108-28848131,28849388-288494... 52 4e-07
03_06_0167 - 32115770-32115886,32116388-32117102,32117178-321173... 35 0.058
06_03_0288 - 19179619-19179714,19180209-19180300,19180408-191804... 30 1.6
10_02_0192 + 6517985-6518348,6518647-6518699,6519984-6520021,652... 29 2.2
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 29 3.8
03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600 29 3.8
11_04_0091 - 13392864-13392950,13393534-13393579,13393706-133938... 28 5.0
09_06_0081 + 20745627-20748144,20748211-20748308 28 5.0
11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084 28 6.7
09_04_0188 - 15410310-15410514,15410597-15410748,15410845-154110... 28 6.7
04_04_0464 - 25405629-25405665,25406644-25406710,25408112-254083... 28 6.7
03_06_0618 - 35132077-35132830,35133690-35135212 28 6.7
03_01_0515 - 3864796-3865425 28 6.7
11_06_0685 - 26272928-26273110,26273186-26273257,26273339-262734... 27 8.8
11_06_0459 + 23830204-23830350,23830419-23830592,23830738-238308... 27 8.8
11_06_0276 - 21826458-21826640,21826716-21826787,21826869-218269... 27 8.8
11_06_0008 - 19181933-19182009,19185148-19185691 27 8.8
05_01_0088 + 581619-581854,581890-582035,583143-583263,583593-58... 27 8.8
04_03_0150 + 11877714-11878487,11880928-11881245 27 8.8
02_04_0115 - 19888252-19888406,19888507-19888573,19888867-198891... 27 8.8
>07_03_1599 -
28022196-28022218,28022355-28022408,28022545-28022620,
28022727-28022758,28022921-28023016,28023105-28023206,
28023291-28023366
Length = 152
Score = 176 bits (429), Expect = 1e-44
Identities = 80/147 (54%), Positives = 102/147 (69%), Gaps = 1/147 (0%)
Frame = +2
Query: 107 RAIAVL-STETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 283
+A+AVL S+E ++G I F+Q DG V G ++GL PG +GFHVH GD + GC+STG H
Sbjct: 3 KAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPH 62
Query: 284 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 463
FNP K+HG P D NRH GDLGN+ + + +++ D QI L+G H IIGRAVV+H
Sbjct: 63 FNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADP 122
Query: 464 DDYGKSDHPDSRKTGNAGGRVACGVIG 544
DD GK H S+ TGNAGGRVACG+IG
Sbjct: 123 DDLGKGGHELSKTTGNAGGRVACGIIG 149
>03_02_1006 +
13150394-13150450,13150787-13150899,13152538-13152709,
13153791-13153878,13153971-13154072,13154197-13154292,
13154547-13154578,13154727-13154802,13155264-13155317,
13155431-13155453
Length = 270
Score = 176 bits (428), Expect = 1e-44
Identities = 81/150 (54%), Positives = 102/150 (68%), Gaps = 1/150 (0%)
Frame = +2
Query: 98 TPSRAIAVL-STETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLST 274
T +A+ VL S+E ++G I F Q DG V G ++GL PG +GFH+H GD + GC+ST
Sbjct: 118 TMVKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMST 177
Query: 275 GSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLH 454
G H+NP K+HG P D RH GDLGNV E+ + I +VD QI L+GP+ IIGRAVV+H
Sbjct: 178 GPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVH 237
Query: 455 EKADDYGKSDHPDSRKTGNAGGRVACGVIG 544
DD GK H S+ TGNAGGRVACG+IG
Sbjct: 238 ADPDDLGKGGHELSKTTGNAGGRVACGIIG 267
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 165 bits (400), Expect = 3e-41
Identities = 76/147 (51%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Frame = +2
Query: 107 RAIAVLS-TETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 283
+A+AVL T + G +T TQ G V +TGL PG +GFH+HE GD + GC+STG H
Sbjct: 53 KAVAVLKGTSQVEGVVTLTQDDQGPTTVNVRVTGLTPGLHGFHLHEFGDTTNGCISTGPH 112
Query: 284 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 463
FNP + HG P D RH GDLGN+V + + +VD QI LSGP+ ++GRA V+HE
Sbjct: 113 FNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELE 172
Query: 464 DDYGKSDHPDSRKTGNAGGRVACGVIG 544
DD GK H S TGNAGGR+ACGV+G
Sbjct: 173 DDLGKGGHELSLSTGNAGGRLACGVVG 199
>03_02_0185 -
6239421-6239480,6239971-6240024,6240523-6240578,
6241108-6241183,6241276-6241307,6241421-6241516,
6242498-6242599,6242728-6242833
Length = 193
Score = 131 bits (316), Expect = 5e-31
Identities = 58/108 (53%), Positives = 75/108 (69%)
Frame = +2
Query: 155 FTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSHFNPEHKDHGHPNDVNRH 334
F G V+G +TGL PG +GFH+H GD + GC STG HFNP +K HG P+D RH
Sbjct: 30 FQDPSTGYTEVRGRVTGLAPGLHGFHIHSFGDTTNGCNSTGPHFNPHNKSHGAPSDDERH 89
Query: 335 VGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGK 478
VGDLGN+V +++ + I + D QISLSGPH I+GRAVV+H +DD G+
Sbjct: 90 VGDLGNIVANKDGVADIFIKDLQISLSGPHSILGRAVVVHADSDDLGR 137
>04_04_0863 +
28847761-28848009,28848108-28848131,28849388-28849460,
28849550-28849684,28850191-28850411,28851747-28851983
Length = 312
Score = 52.0 bits (119), Expect = 4e-07
Identities = 35/121 (28%), Positives = 60/121 (49%)
Frame = +2
Query: 104 SRAIAVLSTETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTGSH 283
S A+A I G + QV V+ +GL PG++G+ ++E GDL+ G STG
Sbjct: 165 SAAVAEFKGPVIFGVVRLAQVNMELAIVEATFSGLSPGKHGWSINEFGDLTRGAESTGKV 224
Query: 284 FNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKA 463
+NP D+ N+ +GDLG + E ++ +++ + +IGR++ L+
Sbjct: 225 YNP--SDYRS----NKPLGDLGTLEAGEKGEAQFSASKEKLKVV---DLIGRSIALYATE 275
Query: 464 D 466
D
Sbjct: 276 D 276
>03_06_0167 -
32115770-32115886,32116388-32117102,32117178-32117383,
32118094-32118138,32119047-32119109,32119726-32119749,
32120673-32120772,32120814-32120907,32121036-32121074,
32121605-32121668
Length = 488
Score = 34.7 bits (76), Expect = 0.058
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 179 VHVQGGITGLPPGEYGFHVHEKGDLSGGCLSTG 277
+ V+ ++GL P +GFHVH G + GC+ G
Sbjct: 37 ITVKENVSGLKPVLHGFHVHALGGTTNGCMRNG 69
>06_03_0288 -
19179619-19179714,19180209-19180300,19180408-19180494,
19180802-19180963,19181032-19181183,19181526-19181872
Length = 311
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -1
Query: 518 RQRCRSSWSPDGHSCRNHQLSHGAP 444
RQ RS + DG CR H L HG P
Sbjct: 101 RQPPRSRFDGDGVGCRLHTLGHGGP 125
>10_02_0192 +
6517985-6518348,6518647-6518699,6519984-6520021,
6522332-6522717,6523752-6523822,6524620-6524732,
6525019-6525337,6525576-6525886,6526493-6527069,
6530483-6530538,6531643-6532126
Length = 923
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 169 LNLSKCDVASNRFCG*NGNSAGRRGEAMMSRRQS-DRSPGM*VEAAFLFSRWLP 11
L+L C V S S GR+GE + RR+S R P VEA RW P
Sbjct: 254 LSLCPCAVRSRE-----SGSGGRQGEDRLGRRESHSRGPCCMVEAINPLWRWFP 302
>07_03_1272 -
25360180-25360286,25360454-25360658,25360748-25360945,
25361034-25361296,25361865-25362009
Length = 305
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 537 TPQATRPPALPVFLESGWSLLP*SSAFSWSTTALP 433
T A +P A+P + W+ P +A W T A P
Sbjct: 249 TDAAAQPAAIPAQAGADWTAAPAPAAGGWDTAAAP 283
>03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600
Length = 274
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Frame = +1
Query: 334 RRRPWKRGL*R-----EPLQQDRLGRRPDLAIGSARHHRQSGG 447
RRRPW RG R P + GRRP G H +SGG
Sbjct: 47 RRRPWSRGGGRAAPESTPPAKYARGRRPRRGSGGHAPHPESGG 89
>11_04_0091 -
13392864-13392950,13393534-13393579,13393706-13393819,
13394135-13394256,13394360-13394431,13395663-13395812,
13399258-13399341,13399459-13399560,13399634-13399671,
13399762-13399864,13399978-13400389,13400493-13400671
Length = 502
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 485 GHSCRNHQLSHGAPPLCR*CRADPI 411
G + +H+ GAPPL R C A P+
Sbjct: 109 GENLNHHRSPAGAPPLTRLCAAGPV 133
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = -3
Query: 534 PQATRPPALPVFLESGWSLLP*SSAFSWSTTALPMMPCGP 415
P+A+ PA PV GW++ P ++ +S+S + P
Sbjct: 591 PRASSAPAPPVAAPRGWTVSPTTARYSFSDSGASSSSAAP 630
>11_03_0045 + 9253101-9253135,9253802-9253917,9255642-9256084
Length = 197
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +1
Query: 304 PRSSERCQPSRRRPWKRGL*REPLQQDRLGRRPD 405
PR S R + RRPW RG R L+ G RPD
Sbjct: 90 PRISGRQRGGGRRPWDRGRRRRRLEH---GGRPD 120
>09_04_0188 -
15410310-15410514,15410597-15410748,15410845-15411003,
15411062-15411367,15412508-15412535,15413174-15413290,
15413649-15413717,15413919-15414103
Length = 406
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -1
Query: 275 QSIDNRRSGRPSHGRGNRIHPEAAQ*CLPEREPSHLEP 162
+ I + R R SHG G P+AAQ L +R P P
Sbjct: 147 EDIRHHRLRRRSHGHGVLQGPQAAQLLLSDRRPELSSP 184
>04_04_0464 -
25405629-25405665,25406644-25406710,25408112-25408373,
25408989-25409198,25409818-25410006,25410087-25410548,
25410889-25410936,25411972-25412301
Length = 534
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -1
Query: 530 KRLD-RQRCRSSWSPDGH-SCRNHQLSHGAP 444
KR+D RQRC+ S+SP SC + +L AP
Sbjct: 453 KRMDDRQRCQCSFSPVARPSCGHDELQAAAP 483
>03_06_0618 - 35132077-35132830,35133690-35135212
Length = 758
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 14 KPTRKQKCCFNSHSWAAIALATAHHGF 94
K T +Q C ++ SW+A+ L+ A HG+
Sbjct: 441 KQTFEQISCLDTFSWSAMILSYAVHGY 467
>03_01_0515 - 3864796-3865425
Length = 209
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 261 PPLRSPFSWTWKPYSPGGSPVMPP 190
PPL P S T P P P+MPP
Sbjct: 49 PPLAPPPSVTSSPPPPAAGPLMPP 72
>11_06_0685 -
26272928-26273110,26273186-26273257,26273339-26273425,
26273566-26273655,26273741-26273785,26273872-26274054,
26274333-26274392,26274521-26274703,26274779-26274907,
26275083-26275380,26275454-26275608,26275791-26275929,
26276015-26276096,26276167-26276285,26276367-26276494,
26276640-26276813,26276882-26277028
Length = 757
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 350 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 502
N F N ++ V+D+ G H + +E +DDY ++H ++K
Sbjct: 394 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKK 444
>11_06_0459 +
23830204-23830350,23830419-23830592,23830738-23830865,
23830947-23831065,23831136-23831217,23831303-23831441,
23831624-23831778,23831852-23832149,23832325-23832453,
23832529-23832711,23832840-23832899,23832973-23833101,
23833177-23833359,23833446-23833490,23833576-23833665,
23833806-23833892,23833974-23834045,23834120-23834302
Length = 800
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 350 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 502
N F N ++ V+D+ G H + +E +DDY ++H ++K
Sbjct: 394 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKK 444
>11_06_0276 -
21826458-21826640,21826716-21826787,21826869-21826955,
21827096-21827185,21827271-21827315,21827402-21827584,
21827660-21827788,21827862-21827921,21828050-21828232,
21828308-21828436,21828612-21828909,21828983-21829137,
21829320-21829458,21829544-21829625,21829696-21829814,
21829896-21830023,21830169-21830342,21830411-21830557
Length = 800
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 350 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 502
N F N ++ V+D+ G H + +E +DDY ++H ++K
Sbjct: 394 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKK 444
>11_06_0008 - 19181933-19182009,19185148-19185691
Length = 206
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/33 (54%), Positives = 18/33 (54%)
Frame = -3
Query: 534 PQATRPPALPVFLESGWSLLP*SSAFSWSTTAL 436
PQA PP LPV LE G P SS S ST L
Sbjct: 123 PQA--PPLLPVLLELGGLRAPVSSLASLSTRLL 153
>05_01_0088 +
581619-581854,581890-582035,583143-583263,583593-583773,
583842-584015,584161-584288,584370-584488,584559-584640,
584726-584864,585047-585201,585275-585572,585748-585876,
585952-586134,586263-586322,586396-586524,586600-586782,
586869-586913,586999-587088,587229-587315,587397-587468,
587813-587887
Length = 943
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +2
Query: 350 NVVFDENHYSRIDLVDDQISLSGPHGIIGRAVVLHEKADDYGKSDHPDSRK 502
N F N ++ V+D+ G H + +E +DDY ++H ++K
Sbjct: 573 NYTFTPNEKLEMNYVNDKAEEFGQHNFQVKEEPKNESSDDYEMNNHRKTKK 623
>04_03_0150 + 11877714-11878487,11880928-11881245
Length = 363
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 266 DNRRSGRPSHGRG 228
DNR GRP HGRG
Sbjct: 279 DNRGEGRPGHGRG 291
>02_04_0115 -
19888252-19888406,19888507-19888573,19888867-19889101,
19889179-19889255,19889350-19889415,19889517-19889565,
19889651-19889701,19889799-19889851,19889973-19890024,
19890126-19890214,19890308-19890393,19890603-19890659,
19890742-19890919,19891852-19891908,19892209-19892439
Length = 500
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = +2
Query: 248 DLSGGCLSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHG 427
DL GG +G P+H+ N N VG N V +N+ + S S G
Sbjct: 357 DLGGGATPSGHANVPKHQPTEVFNTTNAGVGQCSNSVAVDNNIQHSQTIPQDPSASHDFG 416
Query: 428 IIGRAV 445
+ R +
Sbjct: 417 GMTRII 422
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,669,019
Number of Sequences: 37544
Number of extensions: 412044
Number of successful extensions: 1377
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1375
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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