Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_B17
         (387 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3134|AAO41227.1|  405|Drosophila melanogaster CG9614-PH...    28   3.7  
AE014296-3132|AAO41225.1|  401|Drosophila melanogaster CG9614-PJ...    27   6.4  
AE014297-643|AAG22128.1|  422|Drosophila melanogaster CG18747-PA...    27   8.5  

>AE014296-3134|AAO41227.1|  405|Drosophila melanogaster CG9614-PH,
           isoform H protein.
          Length = 405

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 211 SYKYLYSSGQLDICNPV*IQKYKTVKDDTTFNFRRNGKVRCERLLTFLQATARV 50
           +Y+YL S+GQL    P  +      + D  F F R  KV  E L  F++   ++
Sbjct: 96  TYQYLKSTGQLGSLTPSQLNNTAKAEMDRLF-FTRCAKVGSESLTEFMEHLQKI 148


>AE014296-3132|AAO41225.1|  401|Drosophila melanogaster CG9614-PJ,
           isoform J protein.
          Length = 401

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 15/52 (28%), Positives = 27/52 (51%)
 Frame = -3

Query: 211 SYKYLYSSGQLDICNPV*IQKYKTVKDDTTFNFRRNGKVRCERLLTFLQATA 56
           +Y+YL S+GQL   NP+ +   +    +T   F R  +V  E+++   +  A
Sbjct: 96  TYQYLKSTGQLGRVNPMHLNNTRFAGSETVI-FNRPTRVDSEQMVPLFRQLA 146


>AE014297-643|AAG22128.1|  422|Drosophila melanogaster CG18747-PA
           protein.
          Length = 422

 Score = 27.1 bits (57), Expect = 8.5
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 23  VWRGIITEADASRRL*KC*KSFAADLPVPSKIKCCV 130
           V R II+ A     L +C +S   DLPVPS    CV
Sbjct: 238 VERLIISRAKGESVLKQCTRSQTIDLPVPSTPPTCV 273


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,749,735
Number of Sequences: 53049
Number of extensions: 143182
Number of successful extensions: 408
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1066083345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)