Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_B16
         (786 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           27   0.20 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   4.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   7.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   7.4  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   7.4  

>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 373 YIFGGPLDNEYEIDGLHFHWGD 438
           + +  PL ++YE+ GL F W D
Sbjct: 352 FFYPDPLASKYELHGLKFQWTD 373


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 726  VEPFSVQARQD*RQGESMRQLQSGVE 649
            VEP   QA    R+ E MR+   G+E
Sbjct: 1161 VEPTDKQANSKTRRQEMMREAGRGIE 1186


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 289 TITNTGHSVALTIPKYTSEE 348
           TI +  H     +PKYT+EE
Sbjct: 423 TILDYYHKYKENLPKYTTEE 442


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 289 TITNTGHSVALTIPKYTSEE 348
           TI +  H     +PKYT+EE
Sbjct: 423 TILDYYHKYKENLPKYTTEE 442


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 289 TITNTGHSVALTIPKYTSEE 348
           TI +  H     +PKYT+EE
Sbjct: 49  TILDYYHKYKENLPKYTTEE 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,586
Number of Sequences: 438
Number of extensions: 5083
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)