Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_B15
         (846 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    30   0.026
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    26   0.43 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   3.0  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   3.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.3  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   5.3  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   7.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   7.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   9.3  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 29.9 bits (64), Expect = 0.026
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +3

Query: 492 YIIVLITSV*RIRGKHVSCFLSYFFYFIQFYFLSPICCN 608
           Y++ ++TS   +   HV CF SY + F   +F   ICC+
Sbjct: 49  YVLTILTSSVTL---HV-CFNSYMYAFTHIFFFFAICCD 83


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 200 RTLIKILELFNGGGKSMQKSIKKTLYVCVNILSV 301
           RTLI I +   G GK    +  KTL + +NI+S+
Sbjct: 169 RTLIYIDDNVKGLGKQYNIASSKTLKLSINIISL 202


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 539 MFSTYSLYRSN*NNNVGLITFKQIQFV 459
           + S YSL+R   N N  L+  K++ F+
Sbjct: 67  LLSVYSLFRIATNENNSLVINKRLIFI 93


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 539 MFSTYSLYRSN*NNNVGLITFKQIQFV 459
           + S YSL+R   N N  L+  K++ F+
Sbjct: 67  LLSVYSLFRIATNENNSLVINKRLIFI 93


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 558  YFFYFIQFYFLS 593
            YFFY ++FY +S
Sbjct: 1028 YFFYLVKFYKVS 1039


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 558 YFFYFIQFYFLS 593
           YFFY ++FY +S
Sbjct: 309 YFFYLVKFYKVS 320


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = -1

Query: 378 FL*SV*FRLILWLCSFPPENKSFSAYTLKIFTHTYKV 268
           ++ ++  R   W     PE++ ++A+     ++TY+V
Sbjct: 390 YMSTIDLRSSYWQIPLSPESRQYTAFLYNGRSYTYQV 426


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 22  PIIANTHPSKRCNARSKTESKTTVTPR 102
           P+     P+ RCN+R  ++S   V PR
Sbjct: 73  PLNCRDLPNSRCNSRESSDS--LVQPR 97


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 614 QCKILSTTFLNRSKIV 661
           QC+I+S T  N  KIV
Sbjct: 199 QCEIVSDTLRNLDKIV 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,992
Number of Sequences: 336
Number of extensions: 4282
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)