Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_B13
         (767 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK222966-1|BAD96686.1|  364|Homo sapiens PDZ and LIM domain 3 va...    38   0.040
AF039018-1|AAB96665.1|  364|Homo sapiens actinin-associated LIM ...    38   0.040
AF002280-1|AAC16670.1|  364|Homo sapiens alpha-actinin-2 associa...    38   0.040
AY090663-1|AAM09075.1| 1335|Homo sapiens raptor protein.               33   1.1  
AB082951-1|BAC06490.1| 1335|Homo sapiens p150 target of rapamyci...    33   1.1  
AB037724-1|BAA92541.1| 1119|Homo sapiens KIAA1303 protein protein.     33   1.1  
BC008284-1|AAH08284.1|  346|Homo sapiens chromosome 16 open read...    31   3.4  
AY358834-1|AAQ89193.1|  228|Homo sapiens DAKV6410 protein.             31   3.4  
BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein.        31   4.5  
AL365502-2|CAI14576.1|  145|Homo sapiens nasal embryonic LHRH fa...    31   4.5  
AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein ...    31   4.5  
AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein.              31   4.5  
AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein.             31   4.5  
BC010929-1|AAH10929.1|  283|Homo sapiens LIM domain binding 3 pr...    31   6.0  
AJ133767-1|CAB46728.1|  617|Homo sapiens ZASP protein protein.         31   6.0  
AJ133766-1|CAB46727.1|  283|Homo sapiens ZASP protein protein.         31   6.0  
AF276809-1|AAQ14318.1|  398|Homo sapiens Z-band alternatively sp...    31   6.0  
BC027870-1|AAH27870.1|  316|Homo sapiens PDLIM3 protein protein.       30   7.9  
AL831828-1|CAD38541.1|  206|Homo sapiens hypothetical protein pr...    30   7.9  
AF002282-1|AAC16672.1|  316|Homo sapiens alpha-actinin-2 associa...    30   7.9  

>AK222966-1|BAD96686.1|  364|Homo sapiens PDZ and LIM domain 3
           variant protein.
          Length = 364

 Score = 37.9 bits (84), Expect = 0.040
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 237 AMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTS 371
           A +  PN      L   K++H QFN+P+ LYS+ NI  +++ Q S
Sbjct: 167 AAKLAPNIPLEMELPGVKIVHAQFNTPMQLYSDDNIMETLQGQVS 211


>AF039018-1|AAB96665.1|  364|Homo sapiens actinin-associated LIM
           protein protein.
          Length = 364

 Score = 37.9 bits (84), Expect = 0.040
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 237 AMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTS 371
           A +  PN      L   K++H QFN+P+ LYS+ NI  +++ Q S
Sbjct: 167 AAKLAPNIPLEMELPGVKIVHAQFNTPMQLYSDDNIMETLQGQVS 211


>AF002280-1|AAC16670.1|  364|Homo sapiens alpha-actinin-2 associated
           LIM protein protein.
          Length = 364

 Score = 37.9 bits (84), Expect = 0.040
 Identities = 17/45 (37%), Positives = 26/45 (57%)
 Frame = +3

Query: 237 AMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTS 371
           A +  PN      L   K++H QFN+P+ LYS+ NI  +++ Q S
Sbjct: 167 AAKLAPNIPLEMELPGVKIVHAQFNTPMQLYSDDNIMETLQGQVS 211


>AY090663-1|AAM09075.1| 1335|Homo sapiens raptor protein.
          Length = 1335

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +3

Query: 219  RHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYG 398
            R+   P M+ P  HD    + K++      NS +   ++Q I   I +    +  N + G
Sbjct: 965  RYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLNRNPG 1024

Query: 399  RPHVVKRQVF 428
             P VVK   F
Sbjct: 1025 VPSVVKFHPF 1034


>AB082951-1|BAC06490.1| 1335|Homo sapiens p150 target of rapamycin
            (TOR)-scaffold protein containing WD-repeats protein.
          Length = 1335

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +3

Query: 219  RHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYG 398
            R+   P M+ P  HD    + K++      NS +   ++Q I   I +    +  N + G
Sbjct: 965  RYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLNRNPG 1024

Query: 399  RPHVVKRQVF 428
             P VVK   F
Sbjct: 1025 VPSVVKFHPF 1034


>AB037724-1|BAA92541.1| 1119|Homo sapiens KIAA1303 protein protein.
          Length = 1119

 Score = 33.1 bits (72), Expect = 1.1
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +3

Query: 219 RHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYG 398
           R+   P M+ P  HD    + K++      NS +   ++Q I   I +    +  N + G
Sbjct: 749 RYFAQPVMKIPEEHDLESQIRKEREWRFLRNSRVRRQAQQVIQKGITRLDDQIFLNRNPG 808

Query: 399 RPHVVKRQVF 428
            P VVK   F
Sbjct: 809 VPSVVKFHPF 818


>BC008284-1|AAH08284.1|  346|Homo sapiens chromosome 16 open reading
           frame 48 protein.
          Length = 346

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +3

Query: 144 PYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQ 305
           P+ ++P   P     +EPG    ++RH+   A RAP  H     ++ Q VL +Q
Sbjct: 178 PHVSSPQPTPPGPEAKEPGLGVDFIRHNARAAKRAPRRHSCSLQVLAQ-VLEQQ 230


>AY358834-1|AAQ89193.1|  228|Homo sapiens DAKV6410 protein.
          Length = 228

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/54 (31%), Positives = 27/54 (50%)
 Frame = +3

Query: 144 PYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQ 305
           P+ ++P   P     +EPG    ++RH+   A RAP  H     ++ Q VL +Q
Sbjct: 60  PHVSSPQPTPPGPEAKEPGLGVDFIRHNARAAKRAPRRHSCSLQVLAQ-VLEQQ 112


>BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein.
          Length = 1235

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
 Frame = +3

Query: 171 PGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKV----LH---KQFNSPINLY 329
           P    +   GP E+ L+  P P ++ PP       L+ Q +     H   +  + P++ Y
Sbjct: 335 PPLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQPLSAY 394

Query: 330 SEQNIA-NSIRQQTSPLPTNGHYGRPHV 410
           +  +++ NS+    S  P       PH+
Sbjct: 395 NSSSLSLNSLSSSRSSTPAKTQPAPPHI 422


>AL365502-2|CAI14576.1|  145|Homo sapiens nasal embryonic LHRH
           factor protein.
          Length = 145

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
 Frame = +3

Query: 111 KHPEEEVVSNWPYRTTPLVLPGAKVRREPG--PTESYLRHHPNPA 239
           K P+ E +     R  P ++P   V   PG  PT++ LR HP PA
Sbjct: 87  KVPKAEYIPTIIRRDDPSIIPILYVSPAPGLPPTDALLRPHPGPA 131


>AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein 1
           protein.
          Length = 1259

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
 Frame = +3

Query: 171 PGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKV----LH---KQFNSPINLY 329
           P    +   GP E+ L+  P P ++ PP       L+ Q +     H   +  + P++ Y
Sbjct: 335 PPLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQPLSAY 394

Query: 330 SEQNIA-NSIRQQTSPLPTNGHYGRPHV 410
           +  +++ NS+    S  P       PH+
Sbjct: 395 NSSSLSLNSLSSSRSSTPAKTQPAPPHI 422


>AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein.
          Length = 1011

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
 Frame = +3

Query: 171 PGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKV----LH---KQFNSPINLY 329
           P    +   GP E+ L+  P P ++ PP       L+ Q +     H   +  + P++ Y
Sbjct: 87  PPLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQPLSAY 146

Query: 330 SEQNIA-NSIRQQTSPLPTNGHYGRPHV 410
           +  +++ NS+    S  P       PH+
Sbjct: 147 NSSSLSLNSLSSSRSSTPAKTQPAPPHI 174


>AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein.
          Length = 1266

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
 Frame = +3

Query: 171 PGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKV----LH---KQFNSPINLY 329
           P    +   GP E+ L+  P P ++ PP       L+ Q +     H   +  + P++ Y
Sbjct: 366 PPLSTQPPQGPPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQPLSAY 425

Query: 330 SEQNIA-NSIRQQTSPLPTNGHYGRPHV 410
           +  +++ NS+    S  P       PH+
Sbjct: 426 NSSSLSLNSLSSSRSSTPAKTQPAPPHI 453


>BC010929-1|AAH10929.1|  283|Homo sapiens LIM domain binding 3
           protein.
          Length = 283

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 282 KQKVLHKQFNSPINLYSEQNIANSIRQQ 365
           K  ++H Q+N+PI++YS+  I ++I  Q
Sbjct: 146 KATIIHAQYNTPISMYSQDAIMDAIAGQ 173


>AJ133767-1|CAB46728.1|  617|Homo sapiens ZASP protein protein.
          Length = 617

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 282 KQKVLHKQFNSPINLYSEQNIANSIRQQ 365
           K  ++H Q+N+PI++YS+  I ++I  Q
Sbjct: 146 KATIIHAQYNTPISMYSQDAIMDAIAGQ 173


>AJ133766-1|CAB46727.1|  283|Homo sapiens ZASP protein protein.
          Length = 283

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 282 KQKVLHKQFNSPINLYSEQNIANSIRQQ 365
           K  ++H Q+N+PI++YS+  I ++I  Q
Sbjct: 146 KATIIHAQYNTPISMYSQDAIMDAIAGQ 173


>AF276809-1|AAQ14318.1|  398|Homo sapiens Z-band alternatively
           spliced PDZ-motif protein ZASP-6 protein.
          Length = 398

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = +3

Query: 282 KQKVLHKQFNSPINLYSEQNIANSIRQQ 365
           K  ++H Q+N+PI++YS+  I ++I  Q
Sbjct: 261 KATIIHAQYNTPISMYSQDAIMDAIAGQ 288


>BC027870-1|AAH27870.1|  316|Homo sapiens PDLIM3 protein protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 282 KQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRP 404
           K++V+   +NSPI LYS  NI +++  Q   L  +     P
Sbjct: 135 KRQVVSASYNSPIGLYSTSNIQDALHGQLRGLIPSSPQNEP 175


>AL831828-1|CAD38541.1|  206|Homo sapiens hypothetical protein
           protein.
          Length = 206

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 141 WPYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAP 251
           WP +   L  P  + + +PGP+   L   P  AM+AP
Sbjct: 21  WPTQEPSLCPPSQQTQLQPGPSSHQLLTAPPSAMKAP 57


>AF002282-1|AAC16672.1|  316|Homo sapiens alpha-actinin-2 associated
           LIM protein protein.
          Length = 316

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 282 KQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPTNGHYGRP 404
           K++V+   +NSPI LYS  NI +++  Q   L  +     P
Sbjct: 135 KRQVVSASYNSPIGLYSTSNIQDALHGQLRGLIPSSPQNEP 175


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,863,950
Number of Sequences: 237096
Number of extensions: 2392555
Number of successful extensions: 5789
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5787
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)