Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_B12
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical pr... 109 2e-24
Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical pr... 109 2e-24
U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory ... 39 0.003
U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical pr... 32 0.36
AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical... 29 2.6
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 3.4
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 29 3.4
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 3.4
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 3.4
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 29 3.4
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 3.4
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 28 5.9
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 28 5.9
>Z66495-9|CAH19100.1| 670|Caenorhabditis elegans Hypothetical
protein C36A4.9b protein.
Length = 670
Score = 109 bits (262), Expect = 2e-24
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Frame = +1
Query: 232 CGTTPEYEKAQQRSLNDPEGFWGEVGSELEWTKPWDRVLD---DSNAP--FTKWWVGGEM 396
C Y + S+ND + FW V SEL + + + L+ DS A F K+ G +
Sbjct: 24 CAGLQSYHDLYRSSINDADEFWRTVSSELHFEQGTSKGLEWNFDSKAGNVFVKFMDGAKT 83
Query: 397 SVCYNAVDRHVVNGRGEQFALVHDSPLTDTVRKISYNELKDQVSRLAGKLTTLGVSKGAR 576
++ YN ++R++ G G + A + + +YNEL QV + + L + GV +G
Sbjct: 84 NISYNCLERNIKRGYGNKIAYIFEGNEPTDTSTWTYNELHAQVVQFSAVLRSHGVKRGDV 143
Query: 577 VLIYMPLVPEAIIAMLATNRIGAIHSVVFGGFAARELXTRIEHAEPTVII 726
V +Y+P++PE +AMLA RIGA+HSVVF GF+A L R+ A V++
Sbjct: 144 VALYLPMIPELAVAMLACARIGAMHSVVFAGFSAESLAARVVDARCRVLV 193
>Z66495-8|CAA91274.1| 680|Caenorhabditis elegans Hypothetical
protein C36A4.9a protein.
Length = 680
Score = 109 bits (262), Expect = 2e-24
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Frame = +1
Query: 232 CGTTPEYEKAQQRSLNDPEGFWGEVGSELEWTKPWDRVLD---DSNAP--FTKWWVGGEM 396
C Y + S+ND + FW V SEL + + + L+ DS A F K+ G +
Sbjct: 34 CAGLQSYHDLYRSSINDADEFWRTVSSELHFEQGTSKGLEWNFDSKAGNVFVKFMDGAKT 93
Query: 397 SVCYNAVDRHVVNGRGEQFALVHDSPLTDTVRKISYNELKDQVSRLAGKLTTLGVSKGAR 576
++ YN ++R++ G G + A + + +YNEL QV + + L + GV +G
Sbjct: 94 NISYNCLERNIKRGYGNKIAYIFEGNEPTDTSTWTYNELHAQVVQFSAVLRSHGVKRGDV 153
Query: 577 VLIYMPLVPEAIIAMLATNRIGAIHSVVFGGFAARELXTRIEHAEPTVII 726
V +Y+P++PE +AMLA RIGA+HSVVF GF+A L R+ A V++
Sbjct: 154 VALYLPMIPELAVAMLACARIGAMHSVVFAGFSAESLAARVVDARCRVLV 203
>U64598-5|AAK39217.3| 638|Caenorhabditis elegans Mechanosensory
abnormality protein18 protein.
Length = 638
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/99 (27%), Positives = 48/99 (48%)
Frame = +1
Query: 430 VNGRGEQFALVHDSPLTDTVRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEA 609
++ G A+V D+ ++ Y+E+++ A +L L V+ G+RV + +A
Sbjct: 27 ISAHGSNLAIVD----VDSGKQWRYSEIRNWCEMCATRLKELQVTSGSRVAVITGTTGQA 82
Query: 610 IIAMLATNRIGAIHSVVFGGFAARELXTRIEHAEPTVII 726
I LA + IG V G A E+ T ++ +E T +I
Sbjct: 83 IFVHLACSIIGCSAVAVNGWNAVDEIWTLVDLSEATHLI 121
>U41028-1|AAA82354.1| 532|Caenorhabditis elegans Hypothetical
protein C25G6.3 protein.
Length = 532
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/66 (31%), Positives = 32/66 (48%)
Frame = +1
Query: 487 VRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIAMLATNRIGAIHSVVFG 666
VR ++Y EL D R A ++ GV G R+L+ M E ++ L +GAI ++
Sbjct: 112 VRCVTYEELVDGSKRTANYMSHHGVKNGDRILMCMENTVEYVLYQLGGFLLGAIPVLINP 171
Query: 667 GFAARE 684
A E
Sbjct: 172 SHIASE 177
>Z81071-2|CAB03012.1| 618|Caenorhabditis elegans Hypothetical
protein F28F8.2 protein.
Length = 618
Score = 32.3 bits (70), Expect = 0.36
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 487 VRKISYNELKDQVSRLAGKLTTLGVSKGARVLIYMPLVPEAIIAMLATNRIGAIHSVVFG 666
+RK +Y E V ++A L TLG+ KG RV ++ P E ++ A G I V
Sbjct: 85 IRK-TYEEFYHDVRQMAASLYTLGLEKGDRVGVWGPNYYEWVVLQYACAFAGVIQVNVNP 143
Query: 667 GFAAREL 687
+ EL
Sbjct: 144 HYLHEEL 150
>AF016449-14|AAG23991.1| 517|Caenorhabditis elegans Hypothetical
protein C50H11.1 protein.
Length = 517
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 481 DTVRKISYNELKDQVSRLAGKLTT-LGVSKGARVLIYMPLVPEAIIAMLATNRIGAIHSV 657
D RKI+Y + + + A LT + KG RV+ + + A +IGA++
Sbjct: 43 DDGRKITYGDFVQRAGQYATALTEKYKIKKGDRVMARVSKTTDTAALYAACLQIGALYVP 102
Query: 658 VFGGFAARELXTRIEHAEPTVII 726
V E ++ A+P++ I
Sbjct: 103 VNPALTQSEAAHYVKDAKPSLWI 125
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 364 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 510
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 2592 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2640
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 364 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 510
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 1952 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2000
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 364 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 510
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 2592 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2640
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 364 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 510
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 2592 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2640
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 364 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 510
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 1952 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2000
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 364 PFTKWWVGGEMSVCYNAVDRHVVNGRGEQFALVH--DSPLTDTVRKISYNE 510
PF KW++G ++ VC D + N G +H + +T ++ ++YN+
Sbjct: 2592 PFVKWYIGTQL-VCATE-DTEISNANGVYTMKIHGVTADMTGKIKCVAYNK 2640
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 499 SYNELKDQVSRLAGKLTTLG-VSKGARVLIYMPLVPEAIIAMLATNRIGAIHSVVFGGFA 675
SY E++ QV+RLA + L + +V+I+ + +I LA R V+
Sbjct: 143 SYKEVETQVARLAAGIKDLAHEEQNPKVVIFAETRADWLITALACFRANVTIVTVYATLG 202
Query: 676 ARELXTRIEHAEPTVII 726
+ I E T+++
Sbjct: 203 EDAIAHAIGETEATILV 219
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 283 PEGFW-GEVGSELEWTKPWDRVLDDSNAPFT 372
PE F+ E+ S+LE+ K W R+++ S PFT
Sbjct: 3109 PEQFFEDELDSKLEYEK-WRRIIEASECPFT 3138
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,039,287
Number of Sequences: 27780
Number of extensions: 373870
Number of successful extensions: 1031
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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