Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_B11
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    26   0.39 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.91 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   6.4  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 25.8 bits (54), Expect = 0.39
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 405 ITARCKAVFPCLSLRVTSLFLSNEDSLRTSPIKIHSCRG*FS 280
           IT   + +FP L+L++T L  S +  L       H CR  FS
Sbjct: 41  ITKSGRRMFPALNLKITDLDPSADYCLFLEMTLAHHCRFKFS 82



 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 425 VQLLLAHSAPVKVKNLAGWSP 487
           +++ LAH    K  +  GWSP
Sbjct: 69  LEMTLAHHCRFKFSSSVGWSP 89


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 24.6 bits (51), Expect = 0.91
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 93  FFSLGNYEIVPEDIVNSTSTQTFRIN 16
           FF+ G YE+  ++I N  S ++FR+N
Sbjct: 92  FFNQG-YELSKQEIFNCCSKKSFRMN 116


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +2

Query: 593  IRALSQIQDFYMELKWDFHS-WVPLVSRILP 682
            + ALSQ  D+   + +DFH  W      + P
Sbjct: 2498 VPALSQYLDWIAVMTYDFHGHWDKQTGHVAP 2528


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 444 CANNNCTHSLRPNITARCK 388
           C +NN    LR   T RCK
Sbjct: 162 CCDNNFNVFLRQVFTCRCK 180


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,953
Number of Sequences: 336
Number of extensions: 4247
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)