Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_B08
         (731 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    23   3.9  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    22   5.2  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    22   5.2  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    22   5.2  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   6.8  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   9.0  

>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 453 DPPLRKKTPYYNADPKIEAFSPKPIY 530
           DPP R       A+P+ E  + +P+Y
Sbjct: 24  DPPTRPTRLRREAEPEAEPGNNRPVY 49


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 48  HDFYFHFKLSLLNQ*TFNSKMYSNIVITRQI 140
           +++ +++  +  N   +N K+Y NI+   QI
Sbjct: 92  NNYKYNYNNNNYNNNNYNKKLYYNIINIEQI 122


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 48  HDFYFHFKLSLLNQ*TFNSKMYSNIVITRQI 140
           +++ +++  +  N   +N K+Y NI+   QI
Sbjct: 92  NNYKYNYNNNNYNNNNYNKKLYYNIINIEQI 122


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +3

Query: 291 IDPTAAHYKYHDDPYLIPLSNYRKRAY 371
           I   + +Y Y+++ Y    +NY K+ Y
Sbjct: 315 ISSLSNNYNYNNNNYKYNYNNYNKKLY 341


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 453 DPPLRKKTPYYNADPKIEAFSPKPIY 530
           DPP R       A P+ E  + +PIY
Sbjct: 24  DPPTRPARLRREAKPEAEPGNNRPIY 49


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 453 DPPLRKKTPYYNADPKIEAFSPKPIY 530
           DPP R       A P+ E  + +P+Y
Sbjct: 23  DPPTRPTRLRREAKPEAEPGNNRPVY 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,031
Number of Sequences: 438
Number of extensions: 4202
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)