Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_B07
         (801 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    27   0.23 
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    25   0.93 
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    24   1.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   6.5  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 26.6 bits (56), Expect = 0.23
 Identities = 23/89 (25%), Positives = 36/89 (40%)
 Frame = +1

Query: 523 RPLAIELPFLSYKLECKNVMCVLLTSLVHYHNKKKPTSVINLCTK*L*ALIW*FC**FVF 702
           R +   +PF+   +   +V+ +L  S   Y+   KP     +CTK   +LI   C    F
Sbjct: 140 REMCKAVPFVELTVAHASVLTILAISFERYYAICKPLKAGYICTKTRASLI---CLLAWF 196

Query: 703 IDSNDTRTXXXXXXXXTKQYFNESEKPIC 789
           I +  T             YF+ S+ P C
Sbjct: 197 IAALFTSPMLVIAEYKQLDYFDGSKVPAC 225


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.6 bits (51), Expect = 0.93
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +1

Query: 523 RPLAIELPFLSYKLECKNVMCVLLTSLVHYHNKKKPTSVINLCTK 657
           R +   +PF+   +   +V+ +L  S   Y+   KP     +CTK
Sbjct: 140 REMCKAVPFVELTVAHASVLTILAISFERYYAICKPLKAGYICTK 184


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 37  VLFLPTYYLF*X---IINLIF*SCPTITVLIVMIPPIKQTRICNYLVRL*LGEIEQRLHQ 207
           ++F+P Y  F     I+ LIF  CP +T  I+ I    Q   C +L+   +  +++ L +
Sbjct: 139 LVFVPDYVFFVENEPILYLIFSYCPIVTTGIIKI----QFATCAHLILQRVNHVKKILEK 194

Query: 208 K 210
           +
Sbjct: 195 E 195


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 360 HHQAGVHIHLRYQI 319
           HH AG HIH ++ +
Sbjct: 323 HHHAGHHIHAQHHV 336


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -2

Query: 455 DVFLRSEMNYAHMDSLKFFELRWDW 381
           D F+RS +++ +      F+L W++
Sbjct: 122 DAFIRSVISFMNQYEFDGFDLDWEY 146


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,809
Number of Sequences: 336
Number of extensions: 4383
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)