Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_B07
         (801 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   2.7  
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    24   4.8  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         23   8.3  

>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +3

Query: 72   DYQSNLLIMSNDYGFNSDDSPNKTNSHLQLPSPIITRRNRTASTSERALGNPLETGKIK 248
            DY+  L + +N     +D   N     + LPS  +  RN     SE+   NP++  +I+
Sbjct: 1209 DYELRLRVCANYIPELTDSQSNMALIEVTLPSGYVVDRN---PISEQTTVNPIQNMEIR 1264


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 515 LMQGLLPSNYPSYLINL 565
           L+  L+  N+PSYLIN+
Sbjct: 86  LLSKLIKLNFPSYLINI 102


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = +3

Query: 231 ETGKIKTFCREKGHGFVKPEKGGEDIFLHISDIEGEYVPLPGDEVIYR 374
           E+  I TF  +  HG     + G  ++  I++IE +   L  +  +YR
Sbjct: 136 ESDIIMTFLNKNHHGSEMRHEKGRRLWFGIANIEDDVSVLMAELRLYR 183


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,212
Number of Sequences: 2352
Number of extensions: 17716
Number of successful extensions: 120
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)