Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_B03
         (362 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X81900-1|CAA57489.1|   70|Homo sapiens NADH oxidoreductase subun...    42   6e-04
U54993-1|AAD00084.1|   70|Homo sapiens mitochondrial complex I h...    42   6e-04
CR456889-1|CAG33170.1|   70|Homo sapiens ZNF183 protein.               42   6e-04
BC000266-1|AAH00266.1|   70|Homo sapiens NADH dehydrogenase (ubi...    42   6e-04
BC115376-1|AAI15377.1|  954|Homo sapiens C2orf16 protein protein.      30   1.9  
AL834384-1|CAD39047.1|  845|Homo sapiens hypothetical protein pr...    30   1.9  
AC074091-7|AAX93198.1|  939|Homo sapiens unknown protein.              30   1.9  

>X81900-1|CAA57489.1|   70|Homo sapiens NADH oxidoreductase subunit
           MWFE protein.
          Length = 70

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +1

Query: 58  MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG--NP 231
           MW+EILP   ++   + +PG    +IH  T G   +R     +  +L +RD R++G    
Sbjct: 1   MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60

Query: 232 YEVNGLEAI 258
           Y   GLE I
Sbjct: 61  YVSKGLENI 69


>U54993-1|AAD00084.1|   70|Homo sapiens mitochondrial complex I
           hMWFE subunit protein.
          Length = 70

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +1

Query: 58  MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG--NP 231
           MW+EILP   ++   + +PG    +IH  T G   +R     +  +L +RD R++G    
Sbjct: 1   MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60

Query: 232 YEVNGLEAI 258
           Y   GLE I
Sbjct: 61  YVSKGLENI 69


>CR456889-1|CAG33170.1|   70|Homo sapiens ZNF183 protein.
          Length = 70

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +1

Query: 58  MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG--NP 231
           MW+EILP   ++   + +PG    +IH  T G   +R     +  +L +RD R++G    
Sbjct: 1   MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60

Query: 232 YEVNGLEAI 258
           Y   GLE I
Sbjct: 61  YVSKGLENI 69


>BC000266-1|AAH00266.1|   70|Homo sapiens NADH dehydrogenase
           (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa protein.
          Length = 70

 Score = 41.9 bits (94), Expect = 6e-04
 Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
 Frame = +1

Query: 58  MWYEILPSFFIITAAVGLPGWGLYHIHNLTLGNHYRRSLTDRWSRALYQRDMRLTG--NP 231
           MW+EILP   ++   + +PG    +IH  T G   +R     +  +L +RD R++G    
Sbjct: 1   MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60

Query: 232 YEVNGLEAI 258
           Y   GLE I
Sbjct: 61  YVSKGLENI 69


>BC115376-1|AAI15377.1|  954|Homo sapiens C2orf16 protein protein.
          Length = 954

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -2

Query: 271 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 191
           +++PG  PSHSL +D++  +   GTTH
Sbjct: 913 YSFPGERPSHSLSRDFKNQTTLLGTTH 939


>AL834384-1|CAD39047.1|  845|Homo sapiens hypothetical protein
           protein.
          Length = 845

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -2

Query: 271 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 191
           +++PG  PSHSL +D++  +   GTTH
Sbjct: 804 YSFPGERPSHSLSRDFKNQTTLLGTTH 830


>AC074091-7|AAX93198.1|  939|Homo sapiens unknown protein.
          Length = 939

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -2

Query: 271 FNYPG*LPSHSLHKDYQ*ASYPSGTTH 191
           +++PG  PSHSL +D++  +   GTTH
Sbjct: 898 YSFPGERPSHSLSRDFKNQTTLLGTTH 924


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,946,560
Number of Sequences: 237096
Number of extensions: 820981
Number of successful extensions: 1297
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)