Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_B01
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.0  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.0  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    22   4.0  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/59 (23%), Positives = 29/59 (49%)
 Frame = +2

Query: 446 YVSYYMLCN*F*IFRNK*IIFSVYNMNYSFSCTSVS*RYLLSILGYLPRIIYIQKIYLF 622
           +  +++LC  +  +    I+  VY   Y+F   +V   +LL I  ++  + ++  IY F
Sbjct: 92  FTVHFLLCTYY-FYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYF 149


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 441 TIKVSKFIQIKFYLL*WQSINLIE 370
           TI++ K ++I+F +L  Q  NLIE
Sbjct: 457 TIELVKMLKIRFVILNKQINNLIE 480


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 441 TIKVSKFIQIKFYLL*WQSINLIE 370
           TI++ K ++I+F +L  Q  NLIE
Sbjct: 182 TIELVKMLKIRFVILNKQINNLIE 205


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
 Frame = -3

Query: 334 TQHKCNKKFKSSFLPFHFHECT--GMLTSNLTDYL 236
           T  KC  K  +S    H  +C   G + SN  ++L
Sbjct: 636 TCEKCGNKIDTSLFVDHIRQCVGGGTIGSNQRNFL 670


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 537 HVHQFLKDIFY 569
           + H F+KDIFY
Sbjct: 130 YTHNFVKDIFY 140


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 161 TTKECVMIILYHL 123
           T K C ++I++HL
Sbjct: 38  TDKNCTIVIIFHL 50


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 636 NYIYTNKYIFCI*II 592
           NYI T   +FCI I+
Sbjct: 65  NYIRTTSMVFCIIIM 79


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -1

Query: 636 NYIYTNKYIFCI*II 592
           NYI T   +FCI I+
Sbjct: 65  NYIRTTSMVFCIIIM 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,284
Number of Sequences: 336
Number of extensions: 3130
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)