Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_A22
(674 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1298 + 29141578-29141623,29142129-29142250,29143818-291438... 33 0.21
02_03_0121 + 15468894-15468906,15469008-15469193,15474157-154746... 33 0.21
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 32 0.48
06_03_0905 + 25843547-25844314 31 0.64
03_02_0213 + 6480521-6480644,6482347-6482499,6482582-6482980,648... 31 1.1
12_01_0072 + 609254-609722,610355-610421,610652-610745,610984-61... 29 2.6
09_02_0082 - 4060018-4061604 29 3.4
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 29 3.4
05_07_0219 - 28474661-28475146,28475979-28476644 29 3.4
03_05_0710 + 27038709-27038865,27039205-27039346,27039383-270395... 29 3.4
01_05_0454 + 22381302-22382642 29 3.4
01_01_1202 - 9681836-9683146 29 4.5
02_02_0315 + 8872199-8872815,8873141-8873243,8873346-8873405,887... 28 5.9
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129... 28 7.8
09_02_0456 - 9525067-9525422,9525679-9528226 28 7.8
01_06_1315 + 36226262-36226533,36227946-36228060,36228710-362287... 28 7.8
01_06_0650 + 30872350-30872736,30873388-30873639,30873723-308738... 28 7.8
01_06_0430 + 29299970-29300031,29300162-29300294,29301057-293011... 28 7.8
01_06_0295 + 28276505-28276576,28276682-28276888,28277492-282777... 28 7.8
>06_03_1298 +
29141578-29141623,29142129-29142250,29143818-29143874,
29143983-29144138,29144220-29144304,29144575-29144665,
29144807-29144971,29145064-29145186,29145334-29145409,
29145513-29145642,29145951-29147824,29148339-29148529,
29148697-29148860,29149164-29149275,29149276-29149294
Length = 1136
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Frame = +1
Query: 193 SKNTMHTLNTVSHTTYKMASLVTRRV---NTRPATAMSFKALTPWLTPMASSAPLNTPPI 363
S N + T + TT S++T + +T P+TA L P L + +NT +
Sbjct: 702 SVNVISTTGSPLMTTGATHSVLTEEIPSCSTSPSTANGNHLLQPILGRNKHCSMINTEKV 761
Query: 364 PTTASTLSCTENPSATPLK*HMLHQSPRL 450
P +A+ +S + A M+ SP+L
Sbjct: 762 PQSAAPMSVPSSLEAVTATPRMMKDSPKL 790
>02_03_0121 +
15468894-15468906,15469008-15469193,15474157-15474650,
15475090-15475521,15475597-15475821,15476065-15476346,
15476432-15476704,15477680-15477805,15481010-15481288,
15481313-15481588,15481670-15482113,15482200-15482397,
15482574-15482732,15482832-15483085,15483164-15483316,
15483395-15483683,15483769-15483807,15483913-15483951
Length = 1386
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = +1
Query: 214 LNTVSHTTYKMASLVTRRVNTRPATAMSFKALTPWLTPMASSAPLNTPPIPTTASTLSCT 393
L T++ +++ +A V T PA A + + P + A+S+P TP PT AST T
Sbjct: 71 LRTLAQSSFSIAEPAA--VATEPAAAAT-EPPPPSIRTAAASSP-TTPTEPTAASTEHAT 126
Query: 394 ENPSATPL 417
+P+ PL
Sbjct: 127 ASPAQPPL 134
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 31.9 bits (69), Expect = 0.48
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +1
Query: 187 SLSKNTMH-TLNTVSHTTYKMASLVTRRVNTRPATAMSFKALTPWLTPMASSAPLNTPPI 363
SLS N++ T + ++ +N P+ + K +TP +TP + L+T P+
Sbjct: 691 SLSSNSLEETPEVLKSPDQSSVTISDADINASPSKFGASKEVTP-VTP---TTILSTEPV 746
Query: 364 PTTASTLSCTE 396
PT ASTLS E
Sbjct: 747 PTVASTLSKDE 757
>06_03_0905 + 25843547-25844314
Length = 255
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 462 TYAASPVVHSAPIVHSAPVAYSSPIAKYPA-PFTYSAP 572
TY PV + P+V PV Y +P YP P TY P
Sbjct: 120 TYPTPPVT-TPPVVVGPPVTYPTPPVTYPTPPVTYPTP 156
>03_02_0213 +
6480521-6480644,6482347-6482499,6482582-6482980,
6483158-6483234,6483990-6485312
Length = 691
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +3
Query: 225 FAYDVQDGVTGDSKSQHETRDGDVVQGSYSVVDPDGI--KRTVEYTADPHNGF-NAVVH 392
+A DG G KSQ + RD D G DP K V ++ + H F NAV H
Sbjct: 163 YASSANDGAEGSWKSQKKKRDKDDDDGELESGDPSSTSKKPRVVWSVELHQQFVNAVNH 221
>12_01_0072 +
609254-609722,610355-610421,610652-610745,610984-611127
Length = 257
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = +1
Query: 277 RPATAMSFKALTPWLTPMASSAPLNTPPIP----TTASTLSCTENPSATPL 417
R A A +T L P + P+ P P TTA+ +C+ +PS TP+
Sbjct: 25 RSAAAQPLGDVTNLLLPSTPTNPITARPRPLPSDTTAAASTCSASPSHTPV 75
>09_02_0082 - 4060018-4061604
Length = 528
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 280 PATAMSFKALTPWLTPMASSAPLNTPPIPTT-ASTLSCTENPSATPL 417
P +S K + LTP A + P+ TPP P T T T P+ PL
Sbjct: 322 PHLRVSRKPRSLVLTPPAPAPPVATPPTPATPVPTPPMTAPPADVPL 368
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/69 (36%), Positives = 32/69 (46%)
Frame = +1
Query: 280 PATAMSFKALTPWLTPMASSAPLNTPPIPTTASTLSCTENPSATPLK*HMLHQSPRLLPQ 459
PAT + A TP P+A A NTPP P T T T NP+ +P L P P
Sbjct: 15 PATPPTAAAGTP---PLAVPAT-NTPPNPATTPT-PLTPNPNPSP----TLPPPPMSTPP 65
Query: 460 LLMPHPRSY 486
++ P S+
Sbjct: 66 VVAPPMHSF 74
>05_07_0219 - 28474661-28475146,28475979-28476644
Length = 383
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/82 (28%), Positives = 33/82 (40%)
Frame = +1
Query: 235 TYKMASLVTRRVNTRPATAMSFKALTPWLTPMASSAPLNTPPIPTTASTLSCTENPSATP 414
T ++A L R+ T + + P +P SA PP P+ A++ S T +AT
Sbjct: 48 TEELAQLEKTRMTTWARSVVESFDTAPPPSPPPLSATTPHPPPPSPATSSSRTATATATA 107
Query: 415 LK*HMLHQSPRLLPQLLMPHPR 480
P LL P PR
Sbjct: 108 TPTSPTPTPPPTSATLLWPRPR 129
>03_05_0710 +
27038709-27038865,27039205-27039346,27039383-27039558,
27039639-27039703,27040000-27040371,27040429-27040504,
27040505-27040571,27040672-27040825,27041122-27041289,
27041392-27041502,27041612-27041722,27041864-27041881,
27041917-27042018,27042587-27042817,27043390-27043464,
27043744-27043815,27044597-27044782,27044868-27045026,
27045251-27045343,27045730-27045801,27046336-27046426,
27046669-27046847,27047252-27047333,27047526-27047636,
27047715-27047821,27048194-27048271,27048357-27048452,
27048627-27048722,27048839-27048856
Length = 1154
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +3
Query: 468 AASPVVHSAPIVHSAPVAYSSPIA 539
A SPVV APIV PVA SP++
Sbjct: 213 APSPVVIPAPIVDPPPVAVHSPVS 236
>01_05_0454 + 22381302-22382642
Length = 446
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -1
Query: 344 GALDAIGVNHGVRALNDIAVAGLVLTLRVTSDAILYVVCETVLRVCI 204
GA D V ++ + AGL+L R + + Y VC+ V R C+
Sbjct: 120 GAADPDAARRSVFIVHSSSSAGLLLCCRGYVNPVHYYVCDPVARRCV 166
>01_01_1202 - 9681836-9683146
Length = 436
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 307 LTPWLTPMASSAPLNTPPIPTTASTLSCTENPSATP 414
L P P +++A PP P TA+TL E+P+ TP
Sbjct: 11 LAPPSAPGSAAAAAQPPP-PVTAATLVYLESPTDTP 45
>02_02_0315 +
8872199-8872815,8873141-8873243,8873346-8873405,
8873558-8873632,8873718-8873792,8873876-8873956,
8874466-8874657,8874762-8874947,8875047-8875094
Length = 478
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 474 SPVVHSAPIVHSAPVAYSSPIAKYPA 551
S SAP V+SAPVA ++P A PA
Sbjct: 428 SAATESAPAVNSAPVAEAAPEAAPPA 453
>10_08_0630 -
19410852-19411235,19411370-19412257,19412440-19412941,
19413662-19414135,19414982-19415040,19415468-19415629
Length = 822
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 322 TPMASSAPLNTPPIPTTASTLSCTENPSAT 411
TP+ S AP PP P A+ + +P AT
Sbjct: 439 TPITSVAPAPPPPPPAAAAAAASQPSPQAT 468
>09_02_0456 - 9525067-9525422,9525679-9528226
Length = 967
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/81 (23%), Positives = 34/81 (41%)
Frame = +3
Query: 126 GYAAPALHAAPVSYSAPIAKVAVEEYDAHPQYSFAYDVQDGVTGDSKSQHETRDGDVVQG 305
G A ++ A Y AP + + YSF + + VTG S + D D+V
Sbjct: 833 GPATMSVIAGSCGYIAPEYAYTIRVTEKSDVYSFGVVMLELVTGKSPMSSDIGDKDLVAW 892
Query: 306 SYSVVDPDGIKRTVEYTADPH 368
+ + V+ +G + ++ H
Sbjct: 893 AATNVEQNGAESVLDEKIAEH 913
>01_06_1315 +
36226262-36226533,36227946-36228060,36228710-36228752,
36229953-36230329,36230330-36230481,36230591-36230838,
36230919-36231047,36231130-36231739,36231842-36232086,
36232195-36232325
Length = 773
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Frame = +1
Query: 232 TTYKMASLVTRRVNT-RPATAMSFKALTPWLTPMASSAPLNTPP----IPTTASTLSCTE 396
T+ + S T+ V RP + ++ W P+A P PP P S+ C
Sbjct: 165 TSLLLPSATTKPVQKLRPGSRTAWAGHPKWALPVAYEMPAPPPPHAASSPPLPSSSPCRR 224
Query: 397 NPSATPL 417
+P A P+
Sbjct: 225 SPPALPV 231
>01_06_0650 +
30872350-30872736,30873388-30873639,30873723-30873818,
30874005-30874173,30874452-30874552,30874910-30875002,
30876018-30876089,30876509-30876628,30876709-30876759,
30877621-30877809,30878099-30878266
Length = 565
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 289 AMSFKALTPWL-TPMASSAPLNTPPIPTTASTLSCTENPSATP 414
A+ F + +P L + SAP+ PP+P A T S TP
Sbjct: 8 ALPFASRSPQLGAALIRSAPMRCPPLPAAAPTASLLSWRGFTP 50
>01_06_0430 +
29299970-29300031,29300162-29300294,29301057-29301160,
29302201-29302372,29302488-29302628,29302707-29303055,
29303133-29305477
Length = 1101
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 222 SFAYDVQDGVTGDSKSQ--HETRDGDVVQGSYSVVDPDGIKRTVEYTADPHNGFNA 383
S +D Q+ G S + D DV G +++DP K T E T + H GF++
Sbjct: 558 STIWDSQNDKAGPDSSAVVFDQYDSDV--GEENLLDPFSSKHTEEPTVEDHKGFSS 611
>01_06_0295 +
28276505-28276576,28276682-28276888,28277492-28277740,
28277928-28278080,28278158-28278313,28278411-28278570,
28278664-28278815,28278906-28278993,28279111-28279223,
28279271-28279345,28279435-28279669,28279760-28280148
Length = 682
Score = 27.9 bits (59), Expect = 7.8
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 217 NTVSHTTYKMASLVTRRVNTRPATAMSFKALTPWLTPMASSAPLNTPPIPTTASTLSCT 393
N+VS T + + T R T +F AL P TPM +AP+ P+ A+ +S T
Sbjct: 592 NSVSSTPVRPITNNTEDDENR--TPKTFTALNP-KTPMTVTAPMQMAMTPSLANKVSAT 647
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,232,348
Number of Sequences: 37544
Number of extensions: 369849
Number of successful extensions: 1550
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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