Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_A20
         (753 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    45   7e-07
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   3.1  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   3.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   4.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   4.1  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   4.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   7.1  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   9.4  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 45.2 bits (102), Expect = 7e-07
 Identities = 42/217 (19%), Positives = 93/217 (42%), Gaps = 8/217 (3%)
 Frame = +1

Query: 127 ESDDSKCLKESAQATIPIFVEGIENLGVEKLDPFNIKYL----DASSQLLKLILKDVTAR 294
           + + ++C+ E+ +  +     G+++  +  ++P  +  +       S  L+   K++   
Sbjct: 37  QKEYNQCIAEAVRDAVVSLAGGLKSFKILPIEPLAVDSVKIGESQGSVTLRQEYKNIKLY 96

Query: 295 GL-RNTVVKKIRRNKLKSKLSI-TLLCSVDLEGEYELDGQLLILPIRGKGRLHAALRKVQ 468
           GL +N  +K    +  K  LS  +    VD   +Y+++G++L+LP+RG G+ +  +    
Sbjct: 97  GLTKNLEIKNYNIDWDKCILSSESYNPQVDFVADYKIEGKVLLLPVRGAGKSNITM--YD 154

Query: 469 ISVEADLGVET-GADGVQHWTVKDWNHNYQLKDQST-LELDNLFDGNDVLAQAAKQLIAT 642
           +    D+  E    +G  +  +K   H  +       L  +NLFDGN  L +   + I  
Sbjct: 155 LKSHNDIYCEKYEKNGETYLRIK--KHAVKFNPAKVKLRFENLFDGNKELGEQMNRFINE 212

Query: 643 SGNEIILEVGSPIVNAIATKIVENVKNFFKNVPXTEL 753
           +   +  E+ +      +    +     F  VP  ++
Sbjct: 213 NSELLFKELQAAYEETFSLVFTKIDNEIFNRVPFDKI 249


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 391 IPLQGQPNIEALWIVSTSICFAVSFSQQYF 302
           +PL G+  I A+ +VS SIC  V     +F
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNVHF 333


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -3

Query: 391 IPLQGQPNIEALWIVSTSICFAVSFSQQYF 302
           +PL G+  I A+ +VS SIC  V     +F
Sbjct: 304 VPLLGKYLIFAMILVSISICVTVVVLNVHF 333


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +1

Query: 133 DDSKCLKESAQATIPIFVEGIENLGVEKLDP 225
           ++ + LKE+      +F+  +EN+ +  +DP
Sbjct: 168 EELRDLKETYPFNPVLFISSLENISLNGIDP 198


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +1

Query: 133 DDSKCLKESAQATIPIFVEGIENLGVEKLDP 225
           ++ + LKE+      +F+  +EN+ +  +DP
Sbjct: 206 EELRDLKETYPFNPVLFISSLENISLNGIDP 236


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -3

Query: 550 NYGSSLSPSNVEHHPH 503
           N  SSL PS   HH H
Sbjct: 274 NPNSSLQPSLASHHSH 289


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 295 GLRNTVVKKIRRNKLKSKLSITL 363
           GLRNT + +   NKL++ L   L
Sbjct: 352 GLRNTELVERMHNKLRNALQTVL 374


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 572 PWNLTICLTGM 604
           PW L+ICL G+
Sbjct: 6   PWLLSICLFGL 16


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,545
Number of Sequences: 438
Number of extensions: 3701
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)