Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P03_F_A18
         (793 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40945-8|AAM54201.1|  170|Caenorhabditis elegans Hypothetical pr...    61   8e-10
U40945-7|AAS80345.1|  196|Caenorhabditis elegans Hypothetical pr...    61   8e-10
U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical pr...    61   8e-10
U40945-6|AAS80346.1|  437|Caenorhabditis elegans Hypothetical pr...    46   2e-05
AL132858-15|CAB60482.3|  300|Caenorhabditis elegans Hypothetical...    30   1.7  

>U40945-8|AAM54201.1|  170|Caenorhabditis elegans Hypothetical
           protein F10D7.5e protein.
          Length = 170

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 30/91 (32%), Positives = 48/91 (52%)
 Frame = +3

Query: 213 RFHHYHGSNIILFEENTVAYRKASFAHGLTFSEKPLLPGEIFLVEIEKTERGWSGHMRLG 392
           +FH  HGSN+++ +   +A R+ SF  GL FS +P+   E   + + +    WSG +R G
Sbjct: 40  QFHCIHGSNVVILKNGRLAKRRESFCKGLAFSNRPIEIDENVCLRLCEVGTNWSGVLRFG 99

Query: 393 LTLLEPQAAALGDKGLPQYALPDLANNGMSW 485
           +T  +P+     D  +P +A PDL      W
Sbjct: 100 VTNDDPE--MYRDIPVPTFACPDLTTKDGYW 128


>U40945-7|AAS80345.1|  196|Caenorhabditis elegans Hypothetical
           protein F10D7.5b protein.
          Length = 196

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 30/91 (32%), Positives = 48/91 (52%)
 Frame = +3

Query: 213 RFHHYHGSNIILFEENTVAYRKASFAHGLTFSEKPLLPGEIFLVEIEKTERGWSGHMRLG 392
           +FH  HGSN+++ +   +A R+ SF  GL FS +P+   E   + + +    WSG +R G
Sbjct: 40  QFHCIHGSNVVILKNGRLAKRRESFCKGLAFSNRPIEIDENVCLRLCEVGTNWSGVLRFG 99

Query: 393 LTLLEPQAAALGDKGLPQYALPDLANNGMSW 485
           +T  +P+     D  +P +A PDL      W
Sbjct: 100 VTNDDPE--MYRDIPVPTFACPDLTTKDGYW 128


>U40945-5|AAS80344.1|  617|Caenorhabditis elegans Hypothetical
           protein F10D7.5a protein.
          Length = 617

 Score = 61.3 bits (142), Expect = 8e-10
 Identities = 30/91 (32%), Positives = 48/91 (52%)
 Frame = +3

Query: 213 RFHHYHGSNIILFEENTVAYRKASFAHGLTFSEKPLLPGEIFLVEIEKTERGWSGHMRLG 392
           +FH  HGSN+++ +   +A R+ SF  GL FS +P+   E   + + +    WSG +R G
Sbjct: 40  QFHCIHGSNVVILKNGRLAKRRESFCKGLAFSNRPIEIDENVCLRLCEVGTNWSGVLRFG 99

Query: 393 LTLLEPQAAALGDKGLPQYALPDLANNGMSW 485
           +T  +P+     D  +P +A PDL      W
Sbjct: 100 VTNDDPE--MYRDIPVPTFACPDLTTKDGYW 128



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = +3

Query: 213 RFHHYHGSNIILFEENTVAYR-KASFAHGLTFSEKPLLPGEIFLVEIEKTERGWSGHMRL 389
           RFH+  G +I L     +A R +A ++ G  F+E+P+   E  ++ I + +R + G +  
Sbjct: 251 RFHYVKGCHITLNPSRNIATRDQAEYSQGYVFTERPIKNNEKVMIMISQVQRLYEGGLAF 310

Query: 390 GLTLLEPQAAALGDKGLPQYALPDLANNGMSWI 488
           G+T  +P  A++   GLP  +  DL      W+
Sbjct: 311 GVTCCDP--ASIRVAGLPDDS-SDLVEMPEYWV 340


>U40945-6|AAS80346.1|  437|Caenorhabditis elegans Hypothetical
           protein F10D7.5c protein.
          Length = 437

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
 Frame = +3

Query: 213 RFHHYHGSNIILFEENTVAYR-KASFAHGLTFSEKPLLPGEIFLVEIEKTERGWSGHMRL 389
           RFH+  G +I L     +A R +A ++ G  F+E+P+   E  ++ I + +R + G +  
Sbjct: 71  RFHYVKGCHITLNPSRNIATRDQAEYSQGYVFTERPIKNNEKVMIMISQVQRLYEGGLAF 130

Query: 390 GLTLLEPQAAALGDKGLPQYALPDLANNGMSWI 488
           G+T  +P  A++   GLP  +  DL      W+
Sbjct: 131 GVTCCDP--ASIRVAGLPDDS-SDLVEMPEYWV 160


>AL132858-15|CAB60482.3|  300|Caenorhabditis elegans Hypothetical
           protein Y113G7A.10 protein.
          Length = 300

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 356 FFNFY*KYFTG*KGFFTKSQAVCKTSFSVGNCIF 255
           FF F+ ++       F + +AVCK SF +  C+F
Sbjct: 133 FFQFFERFILDNSELFNRLKAVCKYSFCIVFCVF 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,893,528
Number of Sequences: 27780
Number of extensions: 383828
Number of successful extensions: 728
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)