Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_A13
(772 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0145 + 14082864-14082946,14083060-14083267,14083383-140835... 52 5e-07
02_04_0234 + 21141704-21141940,21142408-21142477,21142646-211428... 51 1e-06
11_04_0128 + 13752727-13752809,13752922-13753129,13753238-137533... 49 4e-06
04_04_0105 - 22812730-22813066,22813406-22813565,22814613-22814820 49 4e-06
08_02_1209 - 25311892-25312170,25312254-25312483,25313081-25313426 41 0.001
03_02_0500 - 8915300-8915349,8915567-8915717,8916308-8916516,891... 40 0.002
04_03_0828 - 20118303-20119086,20119197-20119240 38 0.009
12_02_1230 - 27204881-27205765 38 0.012
02_03_0341 - 17948124-17948183,17948417-17948499,17948668-179487... 37 0.020
12_01_0844 + 7915121-7915225,7915724-7915777,7915888-7915968,791... 36 0.036
04_03_0648 - 18393142-18393174,18393259-18393341,18393569-183936... 35 0.063
09_01_0170 - 2459344-2459493,2459720-2459784,2459905-2459963,246... 33 0.25
07_03_1589 + 27948546-27948548,27948890-27948958,27949235-279493... 33 0.33
04_04_1139 + 31173271-31173462,31173928-31174087,31174318-311744... 33 0.33
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 32 0.58
06_02_0052 - 10964659-10964919,10964938-10965006,10965069-109651... 31 0.77
06_02_0051 - 10957857-10958127,10959791-10960035,10960160-109602... 31 0.77
07_03_1593 + 28001165-28001193,28001214-28001288,28002004-28002796 31 1.0
04_04_0286 - 24151135-24151392,24152261-24152330,24153468-24154096 31 1.0
07_03_1592 + 27997033-27997190,27998291-27998365,27998778-27999570 30 2.4
06_03_0618 + 22798419-22798588,22798672-22798771,22798891-227989... 29 3.1
11_03_0015 + 8975199-8975277,8975574-8975607,8976744-8976957,897... 29 4.1
12_02_1189 - 26804775-26804930,26805020-26805123,26805346-268056... 28 7.2
10_06_0164 + 11364436-11367280,11367357-11367715 28 7.2
>11_04_0145 +
14082864-14082946,14083060-14083267,14083383-14083599,
14084170-14084276,14085521-14085674,14086848-14087029
Length = 316
Score = 52.0 bits (119), Expect = 5e-07
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Frame = +2
Query: 68 LKMEISFKGKSILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPS----- 232
+ S G + LVT EL GA + +R ++ L Q E+ +
Sbjct: 7 INKRFSLAGATALVTGGSKGIGRAIVEELASFGATVHTCARNQAELSRCQEEWTAKGLAV 66
Query: 233 -IDIVDVDI-GDWEKTRKVVESL--GHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVK 400
+ + DV + D E V ++ G LVNNA A +P D +P + N +
Sbjct: 67 TVSVCDVAVRADREALAGRVSAMFDGKLSILVNNAGTAYLKPAADLTPEETSRLMTTNFE 126
Query: 401 AVLNISQVVARKMIENKTHGAIVNISSQASKVRF 502
+ ++SQ+ ++++ G+IVNISS AS + F
Sbjct: 127 SCFHLSQLFY-PLLKDSGRGSIVNISSVASVLAF 159
>02_04_0234 +
21141704-21141940,21142408-21142477,21142646-21142839,
21142928-21143100,21144233-21144302
Length = 247
Score = 50.8 bits (116), Expect = 1e-06
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 8/137 (5%)
Frame = +2
Query: 95 KSILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPS-----IDIVDV--D 253
+++L+T EL R G +V R+ H+ SL++E + + + DV D
Sbjct: 23 RTVLITGVSRGLGRALALELARRGHAVVGCGRSADHVRSLEAEIATPARHFLTVADVRSD 82
Query: 254 IGDWEKTRKVVESLGHFDALVNNAAVAVCEPFLDCSPSN-FDKTFDVNVKAVLNISQVVA 430
E + VVE D +VNNA P+ FD D N+K N+ +
Sbjct: 83 SNMAELAKAVVEKKQVPDIIVNNAGTINKNNKTWSVPAEEFDTVVDTNIKGTANVLRHFI 142
Query: 431 RKMIENKTHGAIVNISS 481
MIE K HG IVN+SS
Sbjct: 143 PLMIEKK-HGIIVNLSS 158
>11_04_0128 +
13752727-13752809,13752922-13753129,13753238-13753303,
13753611-13753767,13755629-13755712,13756355-13756461,
13756832-13756958,13757319-13757407,13757812-13757943
Length = 350
Score = 49.2 bits (112), Expect = 4e-06
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 9/154 (5%)
Frame = +2
Query: 83 SFKGKSILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPS------IDIV 244
S G + LVT EL GA + +RT + L + E + + +
Sbjct: 12 SLAGATALVTGGSKGIGRAIVEELASLGATVHTCARTEAPLNRCREELTAKGLAVTVSVC 71
Query: 245 DVDI-GDWEKTRKVVESL--GHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNI 415
DV + D E V L G LVN A ++ +P ++ +P + + +N ++ ++
Sbjct: 72 DVSLRADREALAGTVRELFGGKLSILVNCAGMSFLKPAVELTPDDCSQVMGMNFESCFHL 131
Query: 416 SQVVARKMIENKTHGAIVNISSQASKVRFFIILN 517
SQ+ A +++ G I+NISS AS V F + N
Sbjct: 132 SQL-AYPLLKASQRGCIINISSIASVVAFCSLPN 164
>04_04_0105 - 22812730-22813066,22813406-22813565,22814613-22814820
Length = 234
Score = 49.2 bits (112), Expect = 4e-06
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +2
Query: 227 PSIDIVDVDIGDWEKTRKVV----ESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVN 394
P ++++D+ E R V LG D LVNNA V + P + F + FD N
Sbjct: 8 PRYLLLELDVRSDESARAAVADAVRELGRVDVLVNNAGVHLVAPLAEVPMEEFQQVFDTN 67
Query: 395 VKAVLNISQVVARKMIENKTHGAIVNISS 481
V + + V +MIE + G IVN+ S
Sbjct: 68 VYGAMRLIHAVIPQMIE-REQGTIVNVGS 95
>08_02_1209 - 25311892-25312170,25312254-25312483,25313081-25313426
Length = 284
Score = 41.1 bits (92), Expect = 0.001
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 15/146 (10%)
Frame = +2
Query: 89 KGKSILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEY--------PSIDIV 244
+G+ +LVT +L RAG +VA +R L SL E + V
Sbjct: 21 EGRVVLVTGASSGLGREFCLDLARAGCLVVAAARRADRLRSLCDEINASAPRASAAAAAV 80
Query: 245 DVDIGDWEKTRKVV-----ESLGHFDALVNNAAV--AVCEPFLDCSPSNFDKTFDVNVKA 403
++D+ + ++ G D L+NNA + V P LD ++ N+
Sbjct: 81 ELDVASGGPALEAAVQSAWDAFGRIDVLINNAGLRGGVHSP-LDWPEDEWETLIKTNLTG 139
Query: 404 VLNISQVVARKMIENKTHGAIVNISS 481
+++ V R+M + K G+++NISS
Sbjct: 140 SWLVAKHVCRRMRDAKLKGSVINISS 165
>03_02_0500 -
8915300-8915349,8915567-8915717,8916308-8916516,
8916592-8916808,8917515-8917722,8917839-8917939
Length = 311
Score = 40.3 bits (90), Expect = 0.002
Identities = 37/150 (24%), Positives = 62/150 (41%), Gaps = 9/150 (6%)
Frame = +2
Query: 83 SFKGKSILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYP------SIDIV 244
S +GK+ LVT EL GA + SR L E+ + +
Sbjct: 18 SLQGKTALVTGGTRGIGRAVVEELAALGATVHTCSRKEEELSERLKEWEARGFRVTTSVC 77
Query: 245 DVDIGDW-EKTRKVVESL--GHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNI 415
D+ + D E+ + V L G D LVNN + +P + S + N+++ ++
Sbjct: 78 DLSVRDQRERLLRQVADLFGGKLDILVNNVGTNIRKPTTEFSAEEYSFMMATNLESAYHL 137
Query: 416 SQVVARKMIENKTHGAIVNISSQASKVRFF 505
Q ++ +++ G+IV ISS V F
Sbjct: 138 CQ-LSHPLLKASGSGSIVFISSVCGLVAVF 166
>04_03_0828 - 20118303-20119086,20119197-20119240
Length = 275
Score = 37.9 bits (84), Expect = 0.009
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +2
Query: 185 SRTRSHLESLQSEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAAV--AVCEPFLDC 358
+R + L S + Y D+ D V G D + NNA + A C L+
Sbjct: 56 ARLCAELGSATASYVRCDVTSED-DVAAAVDHAVARYGKLDVMFNNAGIGGAACHSILES 114
Query: 359 SPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKV 496
+ ++FD+ VN+ ++ AR M+ G I+ +S AS V
Sbjct: 115 TKADFDRVLAVNLTGPFLGTKHAARVMVAAGRGGCIIGTASLASAV 160
>12_02_1230 - 27204881-27205765
Length = 294
Score = 37.5 bits (83), Expect = 0.012
Identities = 24/93 (25%), Positives = 41/93 (44%)
Frame = +2
Query: 203 LESLQSEYPSIDIVDVDIGDWEKTRKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKT 382
L L +++ +D+ + + R + E G D LVNNA + P + +
Sbjct: 57 LAGLDADHLPLDVTSDESVEGAVARVLAEH-GRVDVLVNNAGIGCTGPLAELRGEAVRRA 115
Query: 383 FDVNVKAVLNISQVVARKMIENKTHGAIVNISS 481
DVN L + + VA M ++ G +VN+ S
Sbjct: 116 MDVNFLGQLRMVRAVAPHMASRRS-GRVVNVGS 147
>02_03_0341 -
17948124-17948183,17948417-17948499,17948668-17948761,
17948848-17948982,17949099-17949131,17949207-17949301,
17949394-17949439,17949517-17949597,17949874-17949927,
17950361-17950506,17952192-17952330
Length = 321
Score = 36.7 bits (81), Expect = 0.020
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 275 RKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKT 454
+ V++ G D LVNNA + L S + D+N+ V +Q A K++ K
Sbjct: 139 KAAVDTWGTIDVLVNNAGITRDTLLLRMKKSQWQDVVDLNLTGVFLCTQ-AATKVMMKKK 197
Query: 455 HGAIVNISS 481
G ++NI+S
Sbjct: 198 KGRVINIAS 206
>12_01_0844 +
7915121-7915225,7915724-7915777,7915888-7915968,
7916164-7916209,7916311-7916405,7916581-7916613,
7916941-7917286,7917372-7917511
Length = 299
Score = 35.9 bits (79), Expect = 0.036
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = +2
Query: 275 RKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKT 454
R +++ G D LVNNA + + + + + DVN+ V +Q A M+ K
Sbjct: 79 RAAIDTWGTLDVLVNNAGITRDALLMRMKRTQWQEVVDVNLTGVYLCAQAAAGVMMMKK- 137
Query: 455 HGAIVNISS 481
G I+NI+S
Sbjct: 138 KGRIINITS 146
>04_03_0648 -
18393142-18393174,18393259-18393341,18393569-18393662,
18393746-18393880,18394190-18394222,18394302-18394396,
18394494-18394539,18394639-18394719,18395464-18395517,
18395809-18395951,18397645-18397804
Length = 318
Score = 35.1 bits (77), Expect = 0.063
Identities = 20/69 (28%), Positives = 33/69 (47%)
Frame = +2
Query: 275 RKVVESLGHFDALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKT 454
+ ++ G D LVNNA + + S + D+N+ V +Q A K++ K
Sbjct: 145 KAALDKWGTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQ-AATKIMMKKK 203
Query: 455 HGAIVNISS 481
G I+NI+S
Sbjct: 204 KGKIINIAS 212
>09_01_0170 -
2459344-2459493,2459720-2459784,2459905-2459963,
2460441-2460487,2460793-2460894,2461810-2461935,
2462035-2462169,2463396-2463512,2463583-2463714
Length = 310
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 284 VESLGHFDALVNNAAV-AVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVA 430
V++ GH D +V+NAA + L+ DK +D+NVKA + + Q A
Sbjct: 82 VKNFGHIDIVVSNAAANPSVDNILEMKEPILDKLWDINVKASILLLQDAA 131
>07_03_1589 +
27948546-27948548,27948890-27948958,27949235-27949335,
27949460-27950173,27951172-27951333,27951669-27952458
Length = 612
Score = 32.7 bits (71), Expect = 0.33
Identities = 34/143 (23%), Positives = 55/143 (38%), Gaps = 8/143 (5%)
Frame = +2
Query: 83 SFKGKSILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEY-PSIDIVDVDIG 259
S GK ++T E + GA ++ S ++ P D+
Sbjct: 350 SLAGKVAIITGGASGIGKVTAKEFIKNGAKVIIADVQDELGHSAAAKLGPDASYTHCDVT 409
Query: 260 DWEKTRKVVESL----GHFDALVNNAAVAVCEPFLDCSP---SNFDKTFDVNVKAVLNIS 418
D + V+ GH D L NNA + P D + +NFD+ +N +A L
Sbjct: 410 DEAQVEAAVDLAVRLHGHLDILYNNAGIIGAMPQDDMASVDLANFDRMMAINARAALVGI 469
Query: 419 QVVARKMIENKTHGAIVNISSQA 487
+ AR M ++ G I+ +S A
Sbjct: 470 KHAARVMAPRRS-GVILCTASDA 491
Score = 30.7 bits (66), Expect = 1.3
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +2
Query: 284 VESLGHFDALVNNAAVAVCEPFLDCSP---SNFDKTFDVNVKAVLNISQVVARKMIENKT 454
V+ GH D L NNA V P D + +NFD+ +N +A L + AR M ++
Sbjct: 130 VKRHGHLDILYNNAGVMGAMPQDDMASVDLANFDRMMAINARAALVGIKHAARVMSPRRS 189
Query: 455 HGAIVNISS 481
G I+ +S
Sbjct: 190 -GVILCTAS 197
>04_04_1139 +
31173271-31173462,31173928-31174087,31174318-31174487,
31174566-31174788,31175053-31175207
Length = 299
Score = 32.7 bits (71), Expect = 0.33
Identities = 37/145 (25%), Positives = 57/145 (39%), Gaps = 14/145 (9%)
Frame = +2
Query: 89 KGKSILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPSIDIVDVDI-GDW 265
+GK+ LVT +L R GA++ + R R L+ + S + V GD
Sbjct: 13 RGKAALVTGGGSGIGFEIAAQLARHGAHVAIMGRRREVLDKAVAALRSHGLRAVGFEGDV 72
Query: 266 EK----TRKVVESLGHF---DALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKAVLNISQV 424
K R V ++ HF D LVN AA D +P F D++ +
Sbjct: 73 RKQEDAARVVAATVQHFGKLDILVNGAAGNFLASPEDLTPKGFRTVVDIDTVGTYTMCYE 132
Query: 425 VARKMIEN------KTHGAIVNISS 481
+ + + T G I+NIS+
Sbjct: 133 ALKYLKKGGPGKGPSTGGVIINISA 157
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 31.9 bits (69), Expect = 0.58
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +2
Query: 383 FDVNVKAVLNISQVVARKMIENKTHGAIVNISSQASKV 496
FD+NV AV ++ Q V +T G +VNI A+ +
Sbjct: 233 FDMNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSI 270
>06_02_0052 -
10964659-10964919,10964938-10965006,10965069-10965138,
10965861-10966420
Length = 319
Score = 31.5 bits (68), Expect = 0.77
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +2
Query: 311 LVNNAAVAVCEP---FL-DCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIVNIS 478
+VNNA VA EP +L + + + VNV AV ++ V M+ GA+VNI
Sbjct: 109 VVNNAGVA--EPGAVYLHEADVEAWARMVRVNVSAVTEVTAAVLPGMVARGRGGAVVNIG 166
Query: 479 SQASK 493
S AS+
Sbjct: 167 SAASE 171
>06_02_0051 -
10957857-10958127,10959791-10960035,10960160-10960229,
10960319-10960986
Length = 417
Score = 31.5 bits (68), Expect = 0.77
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +2
Query: 389 VNVKAVLNISQVVARKMIENKTHGAIVNISSQASK 493
VNV AV ++ V M+E GA+VN+ S AS+
Sbjct: 173 VNVSAVTEVTAAVLPGMVERGRGGAVVNLGSAASE 207
>07_03_1593 + 28001165-28001193,28001214-28001288,28002004-28002796
Length = 298
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +2
Query: 296 GHFDALVNNAAVAVCEP--FLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIV 469
GH D L NNA + ++FD+ VN +AVL + AR M +T G+I+
Sbjct: 111 GHLDILYNNAGITSSSVGHLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRT-GSIL 169
Query: 470 NISSQA 487
+S A
Sbjct: 170 CTASVA 175
>04_04_0286 - 24151135-24151392,24152261-24152330,24153468-24154096
Length = 318
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 389 VNVKAVLNISQVVARKMIENKTHGAIVNISSQASKV 496
+NV+A+ ++ V M+E K GAIVNI S AS +
Sbjct: 161 LNVEALTRVTHAVLPGMVERK-RGAIVNIGSGASSI 195
>07_03_1592 + 27997033-27997190,27998291-27998365,27998778-27999570
Length = 341
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 296 GHFDALVNNAAV--AVCEPFLDCSPSNFDKTFDVNVKAVLNISQVVARKMIENKTHGAIV 469
G D L NNA V + P ++FD+ VN +AVL + AR M + G+I+
Sbjct: 154 GRLDVLHNNAGVTCSYVGPLASLDLADFDRVMAVNARAVLAGIKHAARVMAPRRA-GSIL 212
Query: 470 NISSQASKV 496
+S A +
Sbjct: 213 CTASVAGVI 221
>06_03_0618 +
22798419-22798588,22798672-22798771,22798891-22798971,
22799131-22799180,22799302-22799452,22800027-22800083,
22800171-22800292,22800397-22800601
Length = 311
Score = 29.5 bits (63), Expect = 3.1
Identities = 32/146 (21%), Positives = 55/146 (37%), Gaps = 10/146 (6%)
Frame = +2
Query: 74 MEISFKGKSILVTXXXXXXXXXXXXELWRAGANIVALSRTRSHLESLQSEYPS------I 235
M+I GK+ LVT L GA + L R + E+ S+ S +
Sbjct: 28 MQIRLDGKNCLVTGANSGIGFATAEGLASRGATVYMLCRNKERGETALSQIRSKTGNMNV 87
Query: 236 DIVDVDIGDWEKTRKVVESLGHFD----ALVNNAAVAVCEPFLDCSPSNFDKTFDVNVKA 403
+ D+ + + D LVNNA + E +P + F VNV A
Sbjct: 88 HLEICDLSSISEVKSFATKFSSTDKPLHVLVNNA--GLLEHKRVTTPEGLELNFAVNVAA 145
Query: 404 VLNISQVVARKMIENKTHGAIVNISS 481
++++V + + ++ +SS
Sbjct: 146 TYTLTELVMPLLEKAAPDARVITVSS 171
>11_03_0015 +
8975199-8975277,8975574-8975607,8976744-8976957,
8977144-8977182,8977266-8977358,8977448-8977546,
8978163-8978264,8978301-8978378,8978696-8978779,
8979172-8979237,8979861-8979947
Length = 324
Score = 29.1 bits (62), Expect = 4.1
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Frame = +2
Query: 233 IDIVDVDIGDWEKTRKV----VESL---GHFDALVNNAAVAVCEP-FLDCSPSNFDKTFD 388
++++ +D+ E++ K ESL D +++NAA + L+ + TFD
Sbjct: 67 VEVLPMDLSSGEESLKEHVHEAESLFSNAGVDYMIHNAAFERPKRRALEETEQGLKATFD 126
Query: 389 VNVKAVLNISQVVARKMIENKTHGAIVNISSQASKV 496
VNV + +++++A M++ + G V +SS A KV
Sbjct: 127 VNVFGTITLTRLLAPSMMD-RGMGHFVVMSSAAGKV 161
>12_02_1189 -
26804775-26804930,26805020-26805123,26805346-26805610,
26805697-26805795,26806284-26806425,26806516-26806621,
26806718-26806785,26806870-26806929,26807292-26807566,
26807671-26807748,26808137-26808391,26809167-26809199,
26809312-26809444,26810060-26810202,26810249-26810327,
26810434-26810533,26811278-26811521,26811620-26811735,
26811845-26812004,26812347-26812574
Length = 947
Score = 28.3 bits (60), Expect = 7.2
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -3
Query: 353 PKMVHIQQQLRCSPTHQSDLKIQQPSS---SSPNLLYQRLQCL*RGIHSEDFLSANEFVT 183
P + + QL Q+D+ + PSS +S N +LQ L +H + EF+
Sbjct: 261 PTCLRSRWQLEAYLNQQADILEKDPSSVPLNSFNATMSQLQKLAPELHR----NCEEFLV 316
Query: 182 MQLYLHLHAIIQXQFLCRYL 123
+Y L++ Q QFL +YL
Sbjct: 317 TMVYFDLYSTCQVQFL-QYL 335
>10_06_0164 + 11364436-11367280,11367357-11367715
Length = 1067
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 398 KAVLNISQVVARKMIENKTHGAI-VNISSQASKVRFFII-LNH 520
+ +LN+S ++ + EN+ HG + ++ + K+++FI+ LNH
Sbjct: 259 RTLLNLSSLIHIGLQENELHGRLPSDLGNGLPKIQYFIVALNH 301
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,867,553
Number of Sequences: 37544
Number of extensions: 266881
Number of successful extensions: 621
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2075009728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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