Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_A12
(849 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0124 + 901034-901153,901455-901481,901713-901792,903739-90... 165 4e-41
05_04_0436 + 21226656-21226695,21226819-21226934,21227059-212272... 164 9e-41
10_07_0071 - 12597668-12597784,12597966-12598166,12598804-12599601 78 1e-14
02_05_1289 - 35470076-35470243,35471032-35471108,35471935-354719... 60 2e-09
02_05_1270 + 35360375-35360494,35361361-35361519,35361611-353617... 57 2e-08
06_03_1505 + 30635572-30635802,30636977-30637135,30637217-306373... 48 1e-05
01_06_1783 + 39845998-39846174,39846260-39846534,39846758-398468... 42 8e-04
11_06_0211 + 21305535-21305895,21306512-21306761,21307543-213076... 31 1.2
11_06_0109 + 20202629-20205452,20206354-20206578,20207208-202080... 31 1.5
10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,338... 30 2.7
06_03_1119 + 27760412-27760527,27760851-27761010,27761283-277614... 29 3.5
08_02_0213 + 14349821-14350396,14351360-14351610,14351695-143520... 29 6.2
04_04_1449 - 33683791-33683940,33684036-33684110,33684849-336849... 29 6.2
11_04_0094 + 13418604-13418680,13419331-13419400,13420078-134202... 28 8.2
05_07_0278 + 28911722-28911934,28912154-28913055,28913142-289135... 28 8.2
>02_01_0124 +
901034-901153,901455-901481,901713-901792,903739-903811,
904015-904072,904561-904615,905140-905164,905361-905421,
907416-907531,907661-907812,907918-908003,908182-908309,
908451-908501,908774-908860,908964-909033,909351-909407,
909729-909865,910313-910390,910971-911057
Length = 515
Score = 165 bits (401), Expect = 4e-41
Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 2/212 (0%)
Frame = +1
Query: 190 LSLVIMAILPIFFGSFRSVKYLNEQKKAGERHETMSNKDALMFPLVASCALFGLYIFFQF 369
+++++ A L ++ G +RSVK ETMS + A+ FPLV S L L++ F+F
Sbjct: 181 VNVILTACLAVYVGCYRSVKPTPPS-------ETMSKEHAMRFPLVGSAMLLSLFLLFKF 233
Query: 370 FSKEYINLLLTGYFFFLGVLALSHLLSPIISFLVPASIPN--IPFHIHFTRGERDNKQDI 543
SK+ +N +LT YFF LG+ AL L P I +P + I + F
Sbjct: 234 LSKDLVNAVLTAYFFILGIAALCATLLPSIKRFLPKEWNDNAIVWCAPFFHS-------- 285
Query: 544 INYKFTSYDVICLLISLCLGAWYLLKKHWIANNLFGIAFAINGVELLHLNNVVTGCILLC 723
++ +FT V+ + WY KKHW+ANN+ GI+F I G+E+L L + TG ILL
Sbjct: 286 LSVEFTKSQVVASIPGFFFCIWYAAKKHWLANNVLGISFCIQGIEMLSLGSFKTGAILLA 345
Query: 724 GLFLYDIFWVFGTNVMVTVAKSFEAPIKLVFP 819
GLF YDIFWVF T VMV+VAKSF+APIKL+FP
Sbjct: 346 GLFFYDIFWVFFTPVMVSVAKSFDAPIKLLFP 377
>05_04_0436 +
21226656-21226695,21226819-21226934,21227059-21227210,
21227309-21227394,21227999-21228126,21228267-21228317,
21228574-21228660,21229418-21229487,21230334-21230470,
21230855-21230932,21231912-21231998
Length = 343
Score = 164 bits (398), Expect = 9e-41
Identities = 89/209 (42%), Positives = 123/209 (58%)
Frame = +1
Query: 193 SLVIMAILPIFFGSFRSVKYLNEQKKAGERHETMSNKDALMFPLVASCALFGLYIFFQFF 372
++++ A L ++ G +RSVK ETMS + A+ FPLV S L L++ F+F
Sbjct: 29 NVILTACLAVYVGCYRSVKPTPPA-------ETMSKEHAMRFPLVGSAMLLSLFLLFKFL 81
Query: 373 SKEYINLLLTGYFFFLGVLALSHLLSPIISFLVPASIPNIPFHIHFTRGERDNKQDIINY 552
SK+ +N +LT YFF LG+ AL L P I +P + + R + ++
Sbjct: 82 SKDLVNTVLTAYFFILGIAALCATLLPSIKRFLPKEWND---NAIVWRAPLFHS---LSV 135
Query: 553 KFTSYDVICLLISLCLGAWYLLKKHWIANNLFGIAFAINGVELLHLNNVVTGCILLCGLF 732
+FT V+ + WY KKHW+ANN+ GI+F I G+E+L L + TG ILL GLF
Sbjct: 136 EFTRSQVVASIPGFFFCIWYAAKKHWLANNVLGISFCIQGIEMLSLGSFKTGAILLSGLF 195
Query: 733 LYDIFWVFGTNVMVTVAKSFEAPIKLVFP 819
YDIFWVF T VMV+VAKSF+APIKL+FP
Sbjct: 196 FYDIFWVFFTPVMVSVAKSFDAPIKLLFP 224
>10_07_0071 - 12597668-12597784,12597966-12598166,12598804-12599601
Length = 371
Score = 77.8 bits (183), Expect = 1e-14
Identities = 66/212 (31%), Positives = 104/212 (49%), Gaps = 12/212 (5%)
Frame = +1
Query: 184 AYLSLVIMAILPIFFGSFRSVKYLNEQKKA---GERHETMSNKDALMFPLVASCALFGLY 354
A L+L++ A+ + + R++ + E ++ E T+ ALM PL +SC+L L
Sbjct: 14 ASLALILTAVSVAYASASRALDHGREMERNLDFSEASITLDRSQALMIPLASSCSL--LL 71
Query: 355 IFFQFFSKEYINLLLTGYFFFLGVLALSHLLSPIISFLVPASIPNIPFHIHFTRGERDNK 534
+F+ F S ++ L+T + +AL LSP ++ + PF
Sbjct: 72 MFYLFSS---VSHLVTAFTAVASAMALFFCLSPYVNCVRSRLGVGDPF-----------V 117
Query: 535 QDIINYKFTSYDVICLLISLCLG---AWYLLKKHWIANNLFGIAFAINGVELLHLNNVVT 705
+ FT LL+++C+G AW L+ HW+ NNL GI+ I V + L N+
Sbjct: 118 SRCCSKPFTRLQG--LLVAICVGTVVAW-LVSGHWLLNNLLGISICIAFVSHVRLPNIKI 174
Query: 706 GCILLCGLFLYDIFWV------FGTNVMVTVA 783
+LL LF+YD+FWV FG NVMV+VA
Sbjct: 175 CALLLVCLFVYDVFWVFFSERFFGANVMVSVA 206
>02_05_1289 -
35470076-35470243,35471032-35471108,35471935-35471971,
35472559-35472618,35472693-35472769,35473244-35473364,
35473505-35473597,35473708-35473770,35475195-35475245,
35475384-35475511,35476249-35476343,35476345-35476427,
35476653-35476808,35477046-35477182,35477243-35477252,
35477291-35477380,35477771-35478070,35479054-35479120,
35479382-35479469,35480317-35480373,35480469-35480592
Length = 693
Score = 60.5 bits (140), Expect = 2e-09
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +1
Query: 544 INYKFTSYDVICLLISLCLGAWYLLKKHWIANNLFGIAFAINGVELLHLNNVVTGCILL 720
++ +FT V+ + WY KKHW+ANN+ GIAF I G+E+L L + TG ILL
Sbjct: 404 LSVEFTKSQVVTSIPGFFFCIWYSAKKHWLANNVLGIAFCIQGIEMLSLGSFKTGAILL 462
>02_05_1270 +
35360375-35360494,35361361-35361519,35361611-35361722,
35362306-35362422,35362570-35362721,35362804-35362986,
35363627-35363661,35363809-35363965,35364052-35364105,
35364196-35364288,35364373-35364515,35364753-35364823,
35365234-35365317,35365408-35365532,35366918-35366938
Length = 541
Score = 57.2 bits (132), Expect = 2e-08
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Frame = +1
Query: 307 ALMFPLVASCALFGLYIFFQFFSKEYINLLLTGYFFFLGVLALSHLLSPIIS-FLVPA-- 477
A++F ++ASC L LY + S ++ LL+ F GV L L ++S + PA
Sbjct: 245 AILFVVIASCFLIMLY---KLMSHWFVELLVV-IFCIGGVEGLQTCLVALLSRWFKPAAE 300
Query: 478 SIPNIPFHIHFTRGERDNKQDIINYKFTSYDVICLLISLCLGAWYLLKKHWIANNLFGIA 657
S +PF ++Y + C++ ++ + + WI ++ GIA
Sbjct: 301 SFVKVPFF------------GAVSYLTIAVCPFCIVFAVIWAVYRRMTYAWIGQDILGIA 348
Query: 658 FAINGVELLHLNNVVTGCILLCGLFLYDIFWVF 756
+ ++++ + N+ G +LL FLYDIFWVF
Sbjct: 349 LIVTVIQIVRIPNLKVGSVLLSCSFLYDIFWVF 381
>06_03_1505 +
30635572-30635802,30636977-30637135,30637217-30637328,
30638004-30638123,30638264-30638415,30638938-30638972,
30639077-30639233,30639328-30639381,30639502-30639594,
30639685-30639827,30639939-30640009,30640323-30640453
Length = 485
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/71 (28%), Positives = 36/71 (50%)
Frame = +1
Query: 544 INYKFTSYDVICLLISLCLGAWYLLKKHWIANNLFGIAFAINGVELLHLNNVVTGCILLC 723
++Y + C++ ++ WI ++ GIA I ++++ + N+ G +LL
Sbjct: 288 VSYLTLAVSPFCIVFAVLWAVHRHFTYAWIGQDILGIALIITVIQIVRVPNLKVGSVLLS 347
Query: 724 GLFLYDIFWVF 756
F YDIFWVF
Sbjct: 348 CAFFYDIFWVF 358
>01_06_1783 +
39845998-39846174,39846260-39846534,39846758-39846891,
39846992-39847116,39847312-39847494,39847610-39847644,
39847756-39847912,39847936-39848049,39848143-39848235,
39848316-39848455,39848606-39848676,39848759-39848839,
39851475-39851954,39852110-39852387,39853346-39854143
Length = 1046
Score = 41.5 bits (93), Expect = 8e-04
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Frame = +1
Query: 583 LISLCLGAWYLLKKHWIANNLFGIAFAINGVELLHLNNVVTGCILLCGLFLYDIFWV--- 753
L+ C + ++ H + + GI I ++++HL N+ LL F+YDIFWV
Sbjct: 361 LMVQCNDDFLVMFAHGLFLFIQGICMMILVLQVVHLPNIKVATALLVSAFMYDIFWVFIS 420
Query: 754 ---FGTNVMVTVAK-SFEAP 801
F +VM+TVA+ S E P
Sbjct: 421 PFIFKKSVMITVARGSDEGP 440
>11_06_0211 +
21305535-21305895,21306512-21306761,21307543-21307652,
21308836-21309067,21310233-21310603,21311434-21311507,
21311727-21311880,21312251-21312434,21313066-21313291,
21313704-21314135,21314399-21314456,21314748-21314829,
21315350-21315421,21316594-21316737,21317379-21317457,
21318023-21318105,21318198-21318252,21318488-21318778
Length = 1085
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 753 HPEDVVQEESAEQDAAGHHVVQMQKLHTVNGERYSKQIIGD 631
HP+ ++E + +AAG +V++ +H VNGE + IGD
Sbjct: 275 HPDR--EDERSRVEAAGGYVLEWAGVHRVNGELALSRAIGD 313
>11_06_0109 +
20202629-20205452,20206354-20206578,20207208-20208091,
20208692-20208814
Length = 1351
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 118 SVKETIQNVTEKPPSSIEGIAIAYLSLVIMAILPIFFGSFRSVKYLN 258
++ E I N+ + P S ++ + + Y + I ILPI G F S+ YL+
Sbjct: 356 NITELIDNLAKCPASKLQQLILKYNN--ITGILPISMGVFSSLVYLD 400
>10_01_0307 + 3382432-3382608,3382690-3382863,3383600-3383695,
3384640-3384709,3385878-3386002,3387128-3387268,
3387362-3387519,3387644-3387803,3390136-3390213,
3390326-3390385,3390473-3390528,3391886-3392090,
3394107-3394192,3394296-3394406,3394536-3394607,
3395453-3395538,3395730-3395878,3396107-3396250,
3396335-3396442,3396997-3397027,3397609-3397713,
3398283-3398407,3398807-3398950,3399073-3399177,
3400748-3400799,3401549-3401696,3401936-3402130,
3402404-3402647,3403152-3403259,3403887-3404034,
3405467-3405525,3405876-3405945,3407008-3407333,
3407666-3409204,3410526-3410733,3410870-3410906,
3411024-3411072,3411143-3411271
Length = 2025
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = -2
Query: 683 RSSTPLMANAIPNRLLAIQCFLSKYQAPRQSEMSKQITS 567
+S T L A ++ +L + C L+KY PR + M K++ S
Sbjct: 1697 KSQTSLSALSLTENILTLLCILAKYHFPRDTGM-KEVDS 1734
>06_03_1119 +
27760412-27760527,27760851-27761010,27761283-27761449,
27761525-27761629,27762097-27762864,27762942-27763131,
27763763-27763940,27764106-27764497
Length = 691
Score = 29.5 bits (63), Expect = 3.5
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 12/107 (11%)
Frame = -1
Query: 756 EHPEDVVQEESAEQDAAGHHVVQMQKLHTVNGERYSKQIIGDPVLFKQV-PSSKTE---R 589
+ PED +AE AA V+Q Q LH + Y+K+ +G ++ P + T R
Sbjct: 9 DKPEDAA---AAEAKAAKLRVLQAQVLHNHHSRTYTKEALGLSFKLLEINPEAYTAWNYR 65
Query: 588 DEQTDHIIG-------CELVIDDILFVVSLTTGEMNMERNVWY-RSW 472
H IG + IDD L VV + + WY R W
Sbjct: 66 KLAFQHNIGELSEPEAIKSAIDDELRVVEVALRQNPKSYGAWYHRKW 112
>08_02_0213 +
14349821-14350396,14351360-14351610,14351695-14352070,
14352210-14352341,14352425-14352600,14353176-14353299
Length = 544
Score = 28.7 bits (61), Expect = 6.2
Identities = 13/39 (33%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 58 HYFL*E-MADMASEIPINIEDSVKETIQNVTEKPPSSIE 171
+YF E + D+ ++I N+ V +Q++T+KPP+++E
Sbjct: 505 YYFEREFLVDVVNKICNNVR-GVNRVVQDITQKPPATVE 542
>04_04_1449 -
33683791-33683940,33684036-33684110,33684849-33684940,
33685020-33685106,33685460-33685615,33685706-33685804,
33686180-33686307,33687355-33687416
Length = 282
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/105 (23%), Positives = 41/105 (39%)
Frame = -1
Query: 801 RSLEALGDGHHDVGTEHPEDVVQEESAEQDAAGHHVVQMQKLHTVNGERYSKQIIGDPVL 622
R++ G V +H D E +DA G V V G + GD +L
Sbjct: 140 RAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGF--VMWAGTWRVGGVLAVSRAFGDKLL 197
Query: 621 FKQVPSSKTERDEQTDHIIGCELVIDDILFVVSLTTGEMNMERNV 487
+ V R+E DH + ++ D L+ V ++M R++
Sbjct: 198 KQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSI 242
>11_04_0094 +
13418604-13418680,13419331-13419400,13420078-13420236,
13420334-13420445,13420530-13420649,13422249-13422406,
13422987-13423217,13424621-13424713,13425088-13425227,
13426331-13426401,13427554-13427637,13427752-13427846
Length = 469
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +1
Query: 571 VICLLISLCLGAWYLLKKHWIANNLFGIAFAINGVELLHLNNVVTGCILLCGLFLYDIFW 750
V L+ S+ L + W L + F I G+E+ LL F+YD+FW
Sbjct: 275 VFILVASVFLLLLFYFMSSWFVWLLI-VLFCIGGIEV--------ASALLSAAFVYDVFW 325
Query: 751 VF 756
VF
Sbjct: 326 VF 327
>05_07_0278 +
28911722-28911934,28912154-28913055,28913142-28913581,
28913628-28913955,28914101-28914743
Length = 841
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -2
Query: 332 DATNGNIRASLLDIVS*RSPAFFCSFRYFTDRNEPKN 222
DA G +R +L +V SP+F C+F + D E +N
Sbjct: 20 DAEMGAMRTMILKVVKDMSPSFCCNFIPWQDLVEVEN 56
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,852,132
Number of Sequences: 37544
Number of extensions: 441285
Number of successful extensions: 1289
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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