Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_A12
(849 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68751-5|CAA92975.1| 468|Caenorhabditis elegans Hypothetical pr... 120 1e-27
U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane p... 48 6e-06
Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical p... 40 0.002
Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical p... 40 0.002
Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical p... 40 0.002
U53155-10|AAC48271.1| 346|Caenorhabditis elegans Seven tm recep... 29 0.13
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 32 0.45
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 32 0.45
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.45
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 32 0.45
U28740-2|AAM51506.2| 417|Caenorhabditis elegans Hypothetical pr... 32 0.59
U28740-1|AAA68317.3| 434|Caenorhabditis elegans Hypothetical pr... 32 0.59
AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin... 30 1.8
U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81067-2|CAB02977.1| 274|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z22179-12|CAA80165.1| 144|Caenorhabditis elegans Hypothetical p... 29 4.2
U41015-3|AAA82312.1| 172|Caenorhabditis elegans Hypothetical pr... 28 7.3
AF038606-8|AAB92022.2| 313|Caenorhabditis elegans Serpentine re... 28 7.3
AF045644-2|AAC02600.1| 454|Caenorhabditis elegans Hypothetical ... 28 9.6
>Z68751-5|CAA92975.1| 468|Caenorhabditis elegans Hypothetical
protein T05E11.5 protein.
Length = 468
Score = 120 bits (289), Expect = 1e-27
Identities = 71/168 (42%), Positives = 99/168 (58%), Gaps = 19/168 (11%)
Frame = +1
Query: 394 LLTGYFFFLGVLALSHLLSPIISF------LVPASIP-NIPFHIHFTRGERDNKQ-DIIN 549
LLT F GV A + LL P ++ LVP+ + N P+ +G ++ ++ DI +
Sbjct: 172 LLTFLICFEGVNAFASLLKPFVTAFLKKMPLVPSFLRFNAPYLFSLKKGNKEMEEGDIED 231
Query: 550 YK-----------FTSYDVICLLISLCLGAWYLLKKHWIANNLFGIAFAINGVELLHLNN 696
K F YD+I LL+ + +LLK+HWI NN+ G++F+I G+E LHL +
Sbjct: 232 AKKKETEYLFKIDFDRYDIIALLMCSPILISHLLKRHWITNNIIGVSFSILGIERLHLAS 291
Query: 697 VVTGCILLCGLFLYDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLLVNG 840
G +LL GLF YDIFWVFGT+VM +VAK +API L FPQD+ NG
Sbjct: 292 FKAGSLLLVGLFFYDIFWVFGTDVMTSVAKGIDAPILLQFPQDIYRNG 339
Score = 48.4 bits (110), Expect = 6e-06
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Frame = +1
Query: 76 MADMASEIPINIEDSVKETIQNVTEKPPSSIEGIAIAYLSLVIMAILPIFFGSFRSVKYL 255
MA+ A+EIP T NVT + E A + L+L M+IL I GS RS +Y+
Sbjct: 1 MAEAATEIP--------PTASNVTV---FTFEEQATSSLALYGMSILCIIIGSIRSAQYI 49
Query: 256 N---EQKKAGERHETMSNKDALMFPLVASCALFGLYIFFQFFSKEYI 387
++K+ E TM ++A FP+ AS LFGLY+FF+ ++ ++
Sbjct: 50 RTNIDKKRLIEGSITM--REARKFPISASLVLFGLYLFFKPAAERFL 94
>U41007-7|AAA82268.3| 516|Caenorhabditis elegans Intramembrane
protease (impas)family protein 3 protein.
Length = 516
Score = 48.4 bits (110), Expect = 6e-06
Identities = 29/133 (21%), Positives = 59/133 (44%)
Frame = +1
Query: 427 LALSHLLSPIISFLVPASIPNIPFHIHFTRGERDNKQDIINYKFTSYDVICLLISLCLGA 606
L L +++ + + VP HI + Y S LL+SL G
Sbjct: 293 LDLLDIIAELFAVHVPIWASVACIHIILLESFSQHMSFYFYYHEESMMYASLLVSLSFGL 352
Query: 607 WYLLKKHWIANNLFGIAFAINGVELLHLNNVVTGCILLCGLFLYDIFWVFGTNVMVTVAK 786
++ +WI+N++ A + + T I + G+ L+D+F+++ +++ TV K
Sbjct: 353 YHECSGNWISNDILAFASIYVVCSRIQAVSYQTAIIFVIGMSLFDLFFLYVVDLLSTVVK 412
Query: 787 SFEAPIKLVFPQD 825
+P+ ++ P+D
Sbjct: 413 ENRSPLMILVPRD 425
>Z80215-14|CAI79138.1| 662|Caenorhabditis elegans Hypothetical
protein C36B1.12c protein.
Length = 662
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 541 IINYKFTSYDVICLLISLCLGAWYLLKKH---WIANNLFGIAFAINGVELLHLNNVVTGC 711
I YK++ + + +S C+ W+++++ +I ++ +A ++ ++ L L ++
Sbjct: 365 IHQYKYSEAFIGIICLSFCV-TWFIIRRQPYAFILLDVINMALCMHVLKCLRLPSLKWIS 423
Query: 712 ILLCGLFLYDIFWVFGTNVMVT 777
IL+ +F+YD F VFGT M T
Sbjct: 424 ILMLCMFVYDAFMVFGTPYMTT 445
>Z80215-13|CAI79137.1| 640|Caenorhabditis elegans Hypothetical
protein C36B1.12b protein.
Length = 640
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 541 IINYKFTSYDVICLLISLCLGAWYLLKKH---WIANNLFGIAFAINGVELLHLNNVVTGC 711
I YK++ + + +S C+ W+++++ +I ++ +A ++ ++ L L ++
Sbjct: 365 IHQYKYSEAFIGIICLSFCV-TWFIIRRQPYAFILLDVINMALCMHVLKCLRLPSLKWIS 423
Query: 712 ILLCGLFLYDIFWVFGTNVMVT 777
IL+ +F+YD F VFGT M T
Sbjct: 424 ILMLCMFVYDAFMVFGTPYMTT 445
>Z80215-12|CAB02277.1| 652|Caenorhabditis elegans Hypothetical
protein C36B1.12a protein.
Length = 652
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +1
Query: 541 IINYKFTSYDVICLLISLCLGAWYLLKKH---WIANNLFGIAFAINGVELLHLNNVVTGC 711
I YK++ + + +S C+ W+++++ +I ++ +A ++ ++ L L ++
Sbjct: 365 IHQYKYSEAFIGIICLSFCV-TWFIIRRQPYAFILLDVINMALCMHVLKCLRLPSLKWIS 423
Query: 712 ILLCGLFLYDIFWVFGTNVMVT 777
IL+ +F+YD F VFGT M T
Sbjct: 424 ILMLCMFVYDAFMVFGTPYMTT 445
>U53155-10|AAC48271.1| 346|Caenorhabditis elegans Seven tm receptor
protein 139 protein.
Length = 346
Score = 28.7 bits (61), Expect(2) = 0.13
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 355 IFFQFFSKEYINLLLTGYFFFLGVLALSHLLSPIISFLVP-ASIPNI 492
+F FF KE+ N +L F V+ L HL P S + AS+ N+
Sbjct: 297 VFAIFFVKEFRNFVLCKKHFVANVIPLQHLPVPRNSLMTAHASLQNL 343
Score = 24.2 bits (50), Expect(2) = 0.13
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = +1
Query: 175 IAIAYLSLVIMAILPIFFGSFRSVKYLNEQKKAGERHETMSNKDALMFPLVASCALFGLY 354
IA+ +L+++ A L I+F + ++E+ K R M+ +FP + G
Sbjct: 209 IALCFLTIIFCA-LKIYFKLKEDIHSMSERTKELNRQLMMTLTFQTIFPFFTMYSTVGAI 267
Query: 355 IFFQFFSKE 381
+ F E
Sbjct: 268 LTLPIFEIE 276
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = +1
Query: 73 EMADMASEIPINIEDS------VKETIQNVTEKPPSSIEGIAIAYL-SLVIMAILPIFFG 231
E+ + +EI NIE++ + + +TEK S++EGI +A S+ + + P+
Sbjct: 2591 EVEKLKAEIDANIEETRAKISEIAGKAEEITEKANSAMEGIRLARRNSVQLNKLAPVIVS 2650
Query: 232 SFRSVKYLNEQKKAGERHETMSNKDALMFPLVA 330
F +K L+ + A + +++S+K + + ++A
Sbjct: 2651 KFEELKKLSSARSA--KVDSVSDKVSQIKEMIA 2681
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = +1
Query: 73 EMADMASEIPINIEDS------VKETIQNVTEKPPSSIEGIAIAYL-SLVIMAILPIFFG 231
E+ + +EI NIE++ + + +TEK S++EGI +A S+ + + P+
Sbjct: 2591 EVEKLKAEIDANIEETRAKISEIAGKAEEITEKANSAMEGIRLARRNSVQLNKLAPVIVS 2650
Query: 232 SFRSVKYLNEQKKAGERHETMSNKDALMFPLVA 330
F +K L+ + A + +++S+K + + ++A
Sbjct: 2651 KFEELKKLSSARSA--KVDSVSDKVSQIKEMIA 2681
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = +1
Query: 73 EMADMASEIPINIEDS------VKETIQNVTEKPPSSIEGIAIAYL-SLVIMAILPIFFG 231
E+ + +EI NIE++ + + +TEK S++EGI +A S+ + + P+
Sbjct: 405 EVEKLKAEIDANIEETRAKISEIAGKAEEITEKANSAMEGIRLARRNSVQLNKLAPVIVS 464
Query: 232 SFRSVKYLNEQKKAGERHETMSNKDALMFPLVA 330
F +K L+ + A + +++S+K + + ++A
Sbjct: 465 KFEELKKLSSARSA--KVDSVSDKVSQIKEMIA 495
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = +1
Query: 73 EMADMASEIPINIEDS------VKETIQNVTEKPPSSIEGIAIAYL-SLVIMAILPIFFG 231
E+ + +EI NIE++ + + +TEK S++EGI +A S+ + + P+
Sbjct: 2591 EVEKLKAEIDANIEETRAKISEIAGKAEEITEKANSAMEGIRLARRNSVQLNKLAPVIVS 2650
Query: 232 SFRSVKYLNEQKKAGERHETMSNKDALMFPLVA 330
F +K L+ + A + +++S+K + + ++A
Sbjct: 2651 KFEELKKLSSARSA--KVDSVSDKVSQIKEMIA 2681
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 32.3 bits (70), Expect = 0.45
Identities = 23/93 (24%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = +1
Query: 73 EMADMASEIPINIEDS------VKETIQNVTEKPPSSIEGIAIAYL-SLVIMAILPIFFG 231
E+ + +EI NIE++ + + +TEK S++EGI +A S+ + + P+
Sbjct: 2591 EVEKLKAEIDANIEETRAKISEIAGKAEEITEKANSAMEGIRLARRNSVQLNKLAPVIVS 2650
Query: 232 SFRSVKYLNEQKKAGERHETMSNKDALMFPLVA 330
F +K L+ + A + +++S+K + + ++A
Sbjct: 2651 KFEELKKLSSARSA--KVDSVSDKVSQIKEMIA 2681
>U28740-2|AAM51506.2| 417|Caenorhabditis elegans Hypothetical
protein B0563.6b protein.
Length = 417
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +1
Query: 712 ILLCGLFLYDIFWVFGTNVMVTVAKSFEAPIKLVFP 819
I C L L I W G V V VA S E I +VFP
Sbjct: 91 IYQCHLMLTLINWALGAGVYVVVALSLERYISIVFP 126
>U28740-1|AAA68317.3| 434|Caenorhabditis elegans Hypothetical
protein B0563.6a protein.
Length = 434
Score = 31.9 bits (69), Expect = 0.59
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = +1
Query: 712 ILLCGLFLYDIFWVFGTNVMVTVAKSFEAPIKLVFP 819
I C L L I W G V V VA S E I +VFP
Sbjct: 100 IYQCHLMLTLINWALGAGVYVVVALSLERYISIVFP 135
>AC025723-4|AAK29933.2| 1335|Caenorhabditis elegans Rab connectin
related protein 2 protein.
Length = 1335
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -1
Query: 768 DVGTEHPEDVVQEESAEQDAAGHHVVQMQKLHTVNGERYSKQIIGDPVLFKQVPSSKTE 592
D+ T E + EE ++ +A H V ++ L N E ++++G V PSS E
Sbjct: 575 DIMTACDEQIGVEEGTDETSAHHAVQLIRALKNKNMEAVKQKVVGGSVSGAATPSSHHE 633
>U41026-6|AAA82353.1| 1081|Caenorhabditis elegans Hypothetical
protein C28G1.4 protein.
Length = 1081
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/87 (22%), Positives = 36/87 (41%)
Frame = -1
Query: 750 PEDVVQEESAEQDAAGHHVVQMQKLHTVNGERYSKQIIGDPVLFKQVPSSKTERDEQTDH 571
P++V +E+ ++ H ++QKL+ K + P +PSS + +D +
Sbjct: 716 PQEVTEEKKGQECVPLRHSSRIQKLNQKPSYFQEKIVSNQPPGSSSIPSSNSSQDNENTE 775
Query: 570 IIGCELVIDDILFVVSLTTGEMNMERN 490
ID + F + G ERN
Sbjct: 776 KFASN--IDVLYFQMRKVLGRGFPERN 800
>Z81067-2|CAB02977.1| 274|Caenorhabditis elegans Hypothetical
protein F23A7.3 protein.
Length = 274
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = -1
Query: 747 EDVVQEESAEQDAAGHHVVQMQKLHTVNGERYSKQI--IGDPVLF--KQVPSSKTERDEQ 580
+D +Q +S + + A V QMQ H E+Y+ I + + V+ K++ +KT D
Sbjct: 199 KDHIQWKSKDTEVAAKMVFQMQNKHKEEVEKYTSTISKLKEEVVAKDKEIVENKTANDNM 258
Query: 579 TDHIIG 562
++G
Sbjct: 259 VSALLG 264
>Z22179-12|CAA80165.1| 144|Caenorhabditis elegans Hypothetical
protein F58A4.9 protein.
Length = 144
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -1
Query: 738 VQEESAEQDAAGHHVVQMQKLHTVNGERYSKQIIGDPVLFKQVPSSKTERDEQTDHIIG 562
V+ E+ E D Q+ +N K I DP F+Q PS+ T + DH IG
Sbjct: 15 VEAETMEVDEQPQETPQVDDEEDLNVPSKKKMEILDPKSFEQDPSNLTLIMYEEDHTIG 73
>U41015-3|AAA82312.1| 172|Caenorhabditis elegans Hypothetical
protein F20B6.4 protein.
Length = 172
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = -1
Query: 597 TERDEQTDH-IIGCELVIDDILFVVSLTTGEMNMERNVWYRSWYQERDDRTKQMTQ 433
TE + TDH I G + + ++F SLTTG + +W Q R+ Q T+
Sbjct: 5 TELVDTTDHSIYGLVVFLVILIFFASLTTGLILCLLKIWCTFHEQRRNSTFDQRTR 60
>AF038606-8|AAB92022.2| 313|Caenorhabditis elegans Serpentine
receptor, class z protein60 protein.
Length = 313
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Frame = +1
Query: 493 PFHIHFTRGERDNKQDIINYKFT----------SYDVICLLISLCLGAWYLLKKH-WIAN 639
PF+++ + R Q ++ Y FT S + + + G +L++K +IA
Sbjct: 37 PFYVYVNKANRKRDQAVLIYPFTKHFFKMTVVMSILYVIFIAGMLSGVLFLVRKSPYIAV 96
Query: 640 NLFGIAFAINGVELL-HLNNVVTGCILLCGLFLY 738
+ I FAI + L+ H+ N++ + + LY
Sbjct: 97 SGLAIFFAIQALSLVTHVFNLLLSLLGIAKFILY 130
>AF045644-2|AAC02600.1| 454|Caenorhabditis elegans Hypothetical
protein F57H12.4 protein.
Length = 454
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 589 SLCLGAWYLLKKHWIANNLFGIAFAINGVELLHLNNVVTGCILLCGLFLYDI 744
SL + W +L+K I N+ I +N V LL ++ +LLCGL L+D+
Sbjct: 51 SLEVDEWSILEKR-IYNSFLKIRL-LNSVFLLKHQTIMM--VLLCGLSLFDV 98
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,353,366
Number of Sequences: 27780
Number of extensions: 411162
Number of successful extensions: 1418
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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