Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P03_F_A06
(702 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 156 2e-38
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 123 2e-28
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 117 2e-26
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 115 5e-26
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 115 5e-26
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 114 1e-25
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 113 2e-25
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 113 2e-25
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 113 2e-25
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 113 2e-25
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 113 2e-25
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 112 5e-25
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 111 7e-25
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 102 5e-22
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 102 5e-22
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 102 5e-22
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 100 2e-21
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 95 6e-20
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 95 8e-20
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 95 8e-20
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 75 9e-14
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 74 2e-13
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 71 1e-12
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 62 5e-10
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 49 7e-06
U15220-1|AAA61796.1| 1051|Drosophila melanogaster gp150 protein ... 29 8.1
BT015195-1|AAT94424.1| 1076|Drosophila melanogaster RE72245p pro... 29 8.1
BT011025-1|AAR30185.1| 1051|Drosophila melanogaster RE46351p pro... 29 8.1
AY029705-1|AAK39644.1| 1051|Drosophila melanogaster leucine rich... 29 8.1
AE013599-3379|AAG22195.1| 1051|Drosophila melanogaster CG5820-PC... 29 8.1
AE013599-3378|AAM68222.1| 1051|Drosophila melanogaster CG5820-PB... 29 8.1
AE013599-3377|AAF46831.1| 1051|Drosophila melanogaster CG5820-PA... 29 8.1
AE013599-3376|AAM68221.1| 1076|Drosophila melanogaster CG5820-PD... 29 8.1
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p protein.
Length = 906
Score = 156 bits (379), Expect = 2e-38
Identities = 89/222 (40%), Positives = 127/222 (57%), Gaps = 1/222 (0%)
Frame = -3
Query: 673 PLVGPSGRLAAFDDDEKAELXADTLQTQCTPSTQSVDPVHVELVDS-EVERRASLPPSDA 497
P+ P G LA +++E+A A+ L+T+ T + + E +DS E + SLP
Sbjct: 379 PIRCPGGELAK-NEEEQANCFANHLETRFTHFQFATTEQYQETLDSLETPLQMSLP---- 433
Query: 496 LPPVTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVW 317
+ P+ E+ + IK L +K+PG D + N +K LPV+ I+ LA I+NA + FP W
Sbjct: 434 IKPIRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQW 493
Query: 316 KEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFR 137
K A ++ IHKPGKP+ P SYRPISLL S D ++ + IL D QFGFR
Sbjct: 494 KMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFR 553
Query: 136 TNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
HS V+QVHRLT+HIL + + Y A+F D+ +AFD+V
Sbjct: 554 QGHSTVEQVHRLTKHILQAFDDKE--YCNAVFIDMQQAFDRV 593
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 123 bits (297), Expect = 2e-28
Identities = 64/162 (39%), Positives = 88/162 (54%)
Frame = -3
Query: 496 LPPVTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVW 317
+ P P EV ++I KAPG D I N +K LP Q I+ + +FNA + FP W
Sbjct: 433 ITPFEPCEVAEVIVRQSNNKAPGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQW 492
Query: 316 KEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFR 137
K + IHKPGKP+ +P SYRPISLL S + ++GI + QFGFR
Sbjct: 493 KLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFR 552
Query: 136 TNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
H V+Q+HR+ E IL + + Y +LF D+ +AFD+V
Sbjct: 553 AGHCTVEQLHRVVEQILTAYDSKE--YCNSLFLDIREAFDRV 592
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 117 bits (281), Expect = 2e-26
Identities = 77/227 (33%), Positives = 112/227 (49%), Gaps = 1/227 (0%)
Frame = -3
Query: 688 VVXMPPLVGPSGRLAAFDDDEKAELXADTLQTQCTPSTQSVDPVHVELVDSEVERRASLP 509
+ + PL PSG D+E+A AD LQ P+ + + L+ A+L
Sbjct: 372 IAPIMPLRSPSGTWFR-SDEERASAFADHLQNVFRPNPSTNTFILPPLI------AANLD 424
Query: 508 PSDALPPVTPMEVKDLIKD-LRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCI 332
P + P E+ +IK+ L PRK+PG+D I+ R++ LP I+ + +FNA
Sbjct: 425 PQEPFE-FRPCELAKVIKEQLNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGY 483
Query: 331 FPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDE 152
FP WK++ ++ I KPGK K P+SYRPISLL + L
Sbjct: 484 FPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTH 543
Query: 151 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
QFGFR H ++QV+R+T I + Y A+F DVA+AFD+V
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRV 588
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 115 bits (277), Expect = 5e-26
Identities = 75/207 (36%), Positives = 103/207 (49%), Gaps = 1/207 (0%)
Frame = -3
Query: 628 EKAELXADTLQTQCTPSTQSVDPVHVELVDS-EVERRASLPPSDALPPVTPMEVKDLIKD 452
EK E+ A+ L+ + TP + + + ++ + E + SLPPS VT EVK+LI
Sbjct: 196 EKTEVFANNLEQRFTPYNYAPESLCRQVEEYLESPFQMSLPPS----AVTLEEVKNLIAK 251
Query: 451 LRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPK 272
L +KAPG D + NR I+LLP Q + L IFN+ + FP WK A +I IHK GK
Sbjct: 252 LPLKKAPGEDLLDNRTIRLLPDQALQFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTP 311
Query: 271 NDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEH 92
D SYRPISLL S + QFGFR H +Q+HR+
Sbjct: 312 TDVDSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNF 371
Query: 91 ILVGLNRPKPLYTGALFFDVAKAFDKV 11
L + + Y F D+ +AFD+V
Sbjct: 372 ALEAMENKE--YAVGAFLDIQQAFDRV 396
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p protein.
Length = 888
Score = 115 bits (277), Expect = 5e-26
Identities = 77/227 (33%), Positives = 112/227 (49%), Gaps = 1/227 (0%)
Frame = -3
Query: 688 VVXMPPLVGPSGRLAAFDDDEKAELXADTLQTQCTPSTQSVDPVHVELVDSEVERRASLP 509
+ + PL PSG D+E+A AD LQ P+ + + L+ A+L
Sbjct: 372 IAPIMPLRSPSGTWFR-SDEERACAFADHLQNVFRPNPSTNTFILPPLI------AANLD 424
Query: 508 PSDALPPVTPMEVKDLIKD-LRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCI 332
P + P E+ +IK+ L PRK+PG+D I+ R++ LP I+ + +FNA
Sbjct: 425 PQEPFE-FRPCELAKVIKEQLNPRKSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGY 483
Query: 331 FPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDE 152
FP WK++ ++ I KPGK K P+SYRPISLL + L
Sbjct: 484 FPQKWKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTH 543
Query: 151 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
QFGFR H ++QV+R+T I + Y A+F DVA+AFD+V
Sbjct: 544 QFGFREKHGTIEQVNRITSEIRTAFEHRE--YCTAIFLDVAQAFDRV 588
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 114 bits (274), Expect = 1e-25
Identities = 66/177 (37%), Positives = 94/177 (53%)
Frame = -3
Query: 541 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLAS 362
+S + R +L + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 463 ESMLTERHNLNKNPHNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 522
Query: 361 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDF 182
I+N+ + +P WK A V I KPGK N+P SYRPISLL
Sbjct: 523 IYNSILRLGYYPEAWKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKV 582
Query: 181 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
K + QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+V
Sbjct: 583 DLFKKAIPLHQFGFRKEHGSEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRV 637
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 113 bits (273), Expect = 2e-25
Identities = 66/177 (37%), Positives = 93/177 (52%)
Frame = -3
Query: 541 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLAS 362
+S + R + + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 347 ESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 406
Query: 361 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDF 182
I+N+ + +P WK A V I KPGK NDP SYRPISLL
Sbjct: 407 IYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRV 466
Query: 181 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
K + QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+V
Sbjct: 467 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRV 521
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 113 bits (273), Expect = 2e-25
Identities = 66/177 (37%), Positives = 93/177 (52%)
Frame = -3
Query: 541 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLAS 362
+S + R + + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 463 ESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 522
Query: 361 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDF 182
I+N+ + +P WK A V I KPGK NDP SYRPISLL
Sbjct: 523 IYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRV 582
Query: 181 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
K + QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+V
Sbjct: 583 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRV 637
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 113 bits (273), Expect = 2e-25
Identities = 66/177 (37%), Positives = 93/177 (52%)
Frame = -3
Query: 541 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLAS 362
+S + R + + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 463 ESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKATLYLIL 522
Query: 361 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDF 182
I+N+ + +P WK A V I KPGK NDP SYRPISLL
Sbjct: 523 IYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRV 582
Query: 181 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
K + QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+V
Sbjct: 583 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRV 637
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 113 bits (273), Expect = 2e-25
Identities = 66/177 (37%), Positives = 93/177 (52%)
Frame = -3
Query: 541 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLAS 362
+S + R + + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 425 ESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 484
Query: 361 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDF 182
I+N+ + +P WK A V I KPGK NDP SYRPISLL
Sbjct: 485 IYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRV 544
Query: 181 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
K + QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+V
Sbjct: 545 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRV 599
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 113 bits (273), Expect = 2e-25
Identities = 66/177 (37%), Positives = 93/177 (52%)
Frame = -3
Query: 541 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLAS 362
+S + R + + P+T E+ D IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 463 ESMLTERYDVNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 522
Query: 361 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDF 182
I+N+ + +P WK A V I KPGK NDP SYRPISLL
Sbjct: 523 IYNSILRIGYYPDAWKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRV 582
Query: 181 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
K + QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+V
Sbjct: 583 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRV 637
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 112 bits (269), Expect = 5e-25
Identities = 65/177 (36%), Positives = 94/177 (53%)
Frame = -3
Query: 541 DSEVERRASLPPSDALPPVTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLAS 362
+S + R +L + P+T E+ + IK+L+ KAPG D I+N++IK LP + + L
Sbjct: 475 ESMLTERHNLNKNPHNQPITLNELNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLIL 534
Query: 361 IFNAAMANCIFPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDF 182
I+N+ + +P WK A V I KPGK N+P SYRPISLL
Sbjct: 535 IYNSILRLGYYPEAWKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRV 594
Query: 181 VSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
K + QFGFR H QQ+ R+T+ IL R + Y A+F D+++AFD+V
Sbjct: 595 DLFKKAIPLHQFGFRKEHGTEQQIARVTQFILEAFERKE--YCSAVFLDISEAFDRV 649
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 111 bits (268), Expect = 7e-25
Identities = 74/207 (35%), Positives = 102/207 (49%), Gaps = 1/207 (0%)
Frame = -3
Query: 628 EKAELXADTLQTQCTPSTQSVDPVHVELVDS-EVERRASLPPSDALPPVTPMEVKDLIKD 452
EK E+ A+ L+ + TP + + + ++ + E + SLP L VT EVK+LI
Sbjct: 394 EKTEVFANNLEQRFTPYNYAPESLCRQVEEYLESPFQMSLP----LSAVTLEEVKNLIAK 449
Query: 451 LRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPK 272
L +KAPG D + NR I+LLP Q + LA IFN+ + FP WK A +I IHK GK
Sbjct: 450 LPLKKAPGEDLLDNRTIRLLPDQALQFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTP 509
Query: 271 NDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEH 92
D SYRP SLL S + QFGFR H +Q+HR+
Sbjct: 510 TDVDSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGFRLQHGTPEQLHRVVNF 569
Query: 91 ILVGLNRPKPLYTGALFFDVAKAFDKV 11
L + + Y F D+ +AFD+V
Sbjct: 570 ALEAMENKE--YAVGAFLDIQQAFDRV 594
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 102 bits (244), Expect = 5e-22
Identities = 72/212 (33%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Frame = -3
Query: 631 DEKAELXADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDA-----LPPVTPMEVK 467
DEKAE A L+++ + Q D E V +E+ + SL S PVT E+
Sbjct: 432 DEKAEAFASHLESRFR-TNQINDAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELN 490
Query: 466 DLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHK 287
LI L +KAPG D ++N+ I LP + + L I+N + FP WK A + I K
Sbjct: 491 GLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPK 550
Query: 286 PGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFRTNHSCVQQVH 107
PGK SYRPISLL D S + QFGFR +H Q+
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLA 610
Query: 106 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
R+T+ IL + A F D+ +AFD+V
Sbjct: 611 RVTQFILKAFDEKD--VCSATFLDITEAFDRV 640
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 102 bits (244), Expect = 5e-22
Identities = 72/212 (33%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Frame = -3
Query: 631 DEKAELXADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDA-----LPPVTPMEVK 467
DEKAE A L+++ + Q D E V +E+ + SL S PVT E+
Sbjct: 432 DEKAEAFASHLESRFR-TNQINDAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELN 490
Query: 466 DLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHK 287
LI L +KAPG D ++N+ I LP + + L I+N + FP WK A + I K
Sbjct: 491 GLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPK 550
Query: 286 PGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFRTNHSCVQQVH 107
PGK SYRPISLL D S + QFGFR +H Q+
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLA 610
Query: 106 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
R+T+ IL + A F D+ +AFD+V
Sbjct: 611 RVTQFILKAFDEKD--VCSATFLDITEAFDRV 640
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 102 bits (244), Expect = 5e-22
Identities = 72/212 (33%), Positives = 98/212 (46%), Gaps = 5/212 (2%)
Frame = -3
Query: 631 DEKAELXADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDA-----LPPVTPMEVK 467
DEKAE A L+++ + Q D E V +E+ + SL S PVT E+
Sbjct: 432 DEKAEAFASHLESRFR-TNQINDAKDREFVRNELNKFKSLNASGESGNSNFKPVTLAELN 490
Query: 466 DLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHK 287
LI L +KAPG D ++N+ I LP + + L I+N + FP WK A + I K
Sbjct: 491 GLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHASISMIPK 550
Query: 286 PGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFRTNHSCVQQVH 107
PGK SYRPISLL D S + QFGFR +H Q+
Sbjct: 551 PGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLA 610
Query: 106 RLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
R+T+ IL + A F D+ +AFD+V
Sbjct: 611 RVTQFILKAFDEKD--VCSATFLDITEAFDRV 640
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding protein,
3' end. ).
Length = 858
Score = 100 bits (239), Expect = 2e-21
Identities = 74/222 (33%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Frame = -3
Query: 673 PLVGPSGRLAAFDDDEKAELXADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDAL 494
P+ SG A D+D +A A LQ TP+ + L V R P
Sbjct: 379 PIKNSSGGWARSDED-RANTFAAHLQNVFTPNQATST---FALPSYPVNRHQQHTPI--- 431
Query: 493 PPVTPMEVKDLIKD-LRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVW 317
P E+ +IKD L P+K+PG+D I+ +I LP + + +FNA FP W
Sbjct: 432 -VFRPKEITKIIKDNLSPKKSPGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQRW 490
Query: 316 KEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFR 137
K +I I KPGK +SYRPISLL + I+ QFGFR
Sbjct: 491 KMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFR 550
Query: 136 TNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
+H ++QV+R+T I + Y A+F DV++AFDKV
Sbjct: 551 ESHGTIEQVNRITTEIRTAFEYRE--YCTAVFLDVSQAFDKV 590
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 95.5 bits (227), Expect = 6e-20
Identities = 63/185 (34%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
Frame = -3
Query: 550 ELVDSEVERRASLPPSDA-----LPPVTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPV 386
E V +E+++ SL S PVT E+ LI L +KAPG D ++N+ I LP
Sbjct: 11 EFVRNELDKFKSLNASGESGNSNFKPVTLAELNGLINSLELKKAPGTDNLNNKTIINLPT 70
Query: 385 QLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXX 206
+ + L I+N + FP WK A + I KPGK SYRPISLL
Sbjct: 71 KARIYLILIYNNILRTGHFPNKWKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERI 130
Query: 205 XXXXXRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAK 26
D S + QFGFR +H Q+ R+T+ IL + A F D+ +
Sbjct: 131 LLKRLYDIDSFAKAIPSHQFGFRKDHGAEHQLARVTQFILKAFDEKD--VCSATFLDITE 188
Query: 25 AFDKV 11
AFD+V
Sbjct: 189 AFDRV 193
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 95.1 bits (226), Expect = 8e-20
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Frame = -3
Query: 628 EKAELXADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDA-LPPVTPMEVKDLIKD 452
EKA + AD Q + + + ++ V ++ A P + A + VT EV ++K
Sbjct: 413 EKANILADVFQLKHNLTHSYSNQNTIDQVKISLQSIAETPNNIAEICRVTYPEVFSIVKA 472
Query: 451 LRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPK 272
L RK+PG DGI N +K LP I + +I N + FP WK A ++ I KPGKP
Sbjct: 473 LHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPP 532
Query: 271 NDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEH 92
++P SYRPISLL F+ L Q+GFR + + +L +
Sbjct: 533 DNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNY 592
Query: 91 ILVGLNRPKPLYTGALFFDVAKAFDKV 11
I + + + G + D+ AFD V
Sbjct: 593 IKESIQSKQSV--GLVTLDIEAAFDTV 617
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 95.1 bits (226), Expect = 8e-20
Identities = 64/207 (30%), Positives = 96/207 (46%), Gaps = 1/207 (0%)
Frame = -3
Query: 628 EKAELXADTLQTQCTPSTQSVDPVHVELVDSEVERRASLPPSDA-LPPVTPMEVKDLIKD 452
EKA + AD Q + + + ++ V ++ A P + A + VT EV ++K
Sbjct: 361 EKANILADVFQLKHNLTHSYSNQNTIDQVKISLQSIAETPNNIAEICRVTYPEVFSIVKA 420
Query: 451 LRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPK 272
L RK+PG DGI N +K LP I + +I N + FP WK A ++ I KPGKP
Sbjct: 421 LHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVPILKPGKPP 480
Query: 271 NDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEH 92
++P SYRPISLL F+ L Q+GFR + + +L +
Sbjct: 481 DNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTILPTLKLRNY 540
Query: 91 ILVGLNRPKPLYTGALFFDVAKAFDKV 11
I + + + G + D+ AFD V
Sbjct: 541 IKESIQSKQSV--GLVTLDIEAAFDTV 565
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 74.9 bits (176), Expect = 9e-14
Identities = 45/128 (35%), Positives = 62/128 (48%)
Frame = -3
Query: 394 LPVQLIVMLASIFNAAMANCIFPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXX 215
LP+ ++ + +FNA FP WK++ +I I KP K K P SYRPISLL
Sbjct: 5 LPMCAVMRICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQP-SYRPISLLTCLSKLF 63
Query: 214 XXXXXXXXRDFVSSKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFD 35
+ + L QF F H ++QV+R+T I + Y ALF D
Sbjct: 64 EKGLLLRISPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEIRTAFEHRE--YCTALFLD 121
Query: 34 VAKAFDKV 11
VA+AFD+V
Sbjct: 122 VAQAFDRV 129
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 74.1 bits (174), Expect = 2e-13
Identities = 46/158 (29%), Positives = 73/158 (46%)
Frame = -3
Query: 484 TPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEAD 305
T +E+++ + + K+PG D +S ++K L L L IFN + +P W+ A
Sbjct: 438 TLLEIENSVAKAKG-KSPGADRVSYPMLKNLSPHLKTKLLDIFNQILTTGKYPHTWRSAI 496
Query: 304 VIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFRTNHS 125
+I I KP KP +D SYRPISLL F+ ++ Q F++NHS
Sbjct: 497 IIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKSNHS 556
Query: 124 CVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
+ + R+ L+ + L D +AFD+V
Sbjct: 557 TMDALLRIQHFASNALSTKN--HVSILATDFERAFDRV 592
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 71.3 bits (167), Expect = 1e-12
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 5/170 (2%)
Frame = -3
Query: 511 PPSDALPPVTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCI 332
PP+ P +T EV + K +RP KAPG DGI ++K + F + + +
Sbjct: 394 PPASDFPCITSCEVVEAAKRIRPNKAPGIDGIPGVIVKAAATARPEVFRDTFQQCLLDGV 453
Query: 331 FPAVWKEADVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDE 152
FP WK+ ++ + K P N P SYRP+ LL S L +
Sbjct: 454 FPKRWKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESPTGLQGQ 513
Query: 151 QFGFRTNHSCVQQVHRLTEHILVGLNRPKPL-----YTGALFFDVAKAFD 17
Q+GFR S + + +T+ L+ + L Y + DV AF+
Sbjct: 514 QYGFRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFN 563
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 62.5 bits (145), Expect = 5e-10
Identities = 54/175 (30%), Positives = 78/175 (44%), Gaps = 2/175 (1%)
Frame = -3
Query: 529 ERRASLPPSDALPPVTPM-EVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLASIFN 353
E A ++ +PP + EV + L+ R++PG DGI+ + K + + LAS+F+
Sbjct: 419 ESEAPTAIAEEVPPALEVFEVDTCVARLKSRRSPGLDGINGTICKAVWRAIPEHLASLFS 478
Query: 352 AAMANCIFPAVWKEADVIGIHK-PGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVS 176
+ FPA WK V+ + K P K K +P+SYR I LL R+ V
Sbjct: 479 RCIRLGYFPAEWKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVNRVRE-VL 537
Query: 175 SKGILIDEQFGFRTNHSCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
+G QFGFR CV+ R H+ + Y F D AFD V
Sbjct: 538 PEG--CRWQFGFRQGR-CVEDAWR---HVKSSVGASAAQYVLGTFVDFKGAFDNV 586
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 48.8 bits (111), Expect = 7e-06
Identities = 40/159 (25%), Positives = 70/159 (44%)
Frame = -3
Query: 487 VTPMEVKDLIKDLRPRKAPGFDGISNRVIKLLPVQLIVMLASIFNAAMANCIFPAVWKEA 308
+T +E+ ++ L+ APG + IS ++IK + +FN N P +K +
Sbjct: 433 ITYLELSSALQTLKGC-APGLNRISYQMIKNSSHTTKNRITKLFNEIF-NSHIPQAYKTS 490
Query: 307 DVIGIHKPGKPKNDPTSYRPISLLMSXXXXXXXXXXXXXRDFVSSKGILIDEQFGFRTNH 128
+I I KP K +SYRPISL V+ ++ D+QFGF+
Sbjct: 491 LIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKGK 550
Query: 127 SCVQQVHRLTEHILVGLNRPKPLYTGALFFDVAKAFDKV 11
S ++++ ++T + D ++AFD+V
Sbjct: 551 S-TSDCLLYVDYLIT----KSKMHTSLVTLDFSRAFDRV 584
>U15220-1|AAA61796.1| 1051|Drosophila melanogaster gp150 protein
protein.
Length = 1051
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 559 VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 461
+H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 35 IHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>BT015195-1|AAT94424.1| 1076|Drosophila melanogaster RE72245p
protein.
Length = 1076
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 559 VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 461
+H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 60 IHDDLTENELNSGEEVSPTESLPKISTPKVKDL 92
>BT011025-1|AAR30185.1| 1051|Drosophila melanogaster RE46351p
protein.
Length = 1051
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 559 VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 461
+H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 35 IHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>AY029705-1|AAK39644.1| 1051|Drosophila melanogaster leucine rich
repeat protein GP150 protein.
Length = 1051
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 559 VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 461
+H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 35 IHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>AE013599-3379|AAG22195.1| 1051|Drosophila melanogaster CG5820-PC,
isoform C protein.
Length = 1051
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 559 VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 461
+H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 35 IHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>AE013599-3378|AAM68222.1| 1051|Drosophila melanogaster CG5820-PB,
isoform B protein.
Length = 1051
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 559 VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 461
+H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 35 IHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>AE013599-3377|AAF46831.1| 1051|Drosophila melanogaster CG5820-PA,
isoform A protein.
Length = 1051
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 559 VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 461
+H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 35 IHDDLTENELNSGEEVSPTESLPKISTPKVKDL 67
>AE013599-3376|AAM68221.1| 1076|Drosophila melanogaster CG5820-PD,
isoform D protein.
Length = 1076
Score = 28.7 bits (61), Expect = 8.1
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = -3
Query: 559 VHVELVDSEVERRASLPPSDALPPVTPMEVKDL 461
+H +L ++E+ + P+++LP ++ +VKDL
Sbjct: 60 IHDDLTENELNSGEEVSPTESLPKISTPKVKDL 92
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,105,221
Number of Sequences: 53049
Number of extensions: 692577
Number of successful extensions: 2206
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 2067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2177
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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