Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_P15
         (511 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0186 + 11595041-11595182,11596442-11596473,11596628-115967...    73   1e-13
10_06_0185 + 11592108-11592265,11592585-11592685,11593917-115939...    33   0.10 
08_01_0783 + 7585326-7585477,7586420-7586589,7586687-7586801,758...    28   5.0  
04_04_1094 - 30832987-30833316,30833530-30834273,30834484-308347...    28   5.0  
07_03_0480 + 18567759-18567956,18568140-18569226,18570025-18570380     27   8.8  

>10_06_0186 +
           11595041-11595182,11596442-11596473,11596628-11596722,
           11596841-11596925
          Length = 117

 Score = 73.3 bits (172), Expect = 1e-13
 Identities = 33/60 (55%), Positives = 45/60 (75%)
 Frame = -3

Query: 242 NSIPGITSIYEWKNEINEDKETLLMIKTRTSQVDKLTEYVRSNHPYEVCEVISVPIKNGN 63
           NS  GI S+Y W+ ++  D E LL+IKTR S +D LTE+V++NH Y+V EVI++PIK GN
Sbjct: 44  NSGNGIESVYWWEGKVQTDAEELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGGN 103


>10_06_0185 +
           11592108-11592265,11592585-11592685,11593917-11593979,
           11594407-11594426
          Length = 113

 Score = 33.5 bits (73), Expect = 0.10
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 308 PNDEVGRTIGHGLVKNKLAACVNSIP 231
           PN E G+ +   ++  KLAACVN +P
Sbjct: 82  PNKEAGKRLAGSIISEKLAACVNIVP 107


>08_01_0783 +
           7585326-7585477,7586420-7586589,7586687-7586801,
           7586887-7587055,7587185-7587319,7587409-7587728,
           7587992-7588127,7588224-7588472,7588567-7588787,
           7588906-7589164,7589264-7589971,7590095-7590424
          Length = 987

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 353 QKTYLFDYKQNKASLLIDKKLKQFSCLKKSACYLLNI 463
           Q T  F Y  N++ LLI K +KQ   ++ S C+   I
Sbjct: 343 QLTLQFLYSHNRSDLLILKTIKQALEMRNSVCHSATI 379


>04_04_1094 -
           30832987-30833316,30833530-30834273,30834484-30834742,
           30834821-30835041,30835127-30835375,30835460-30835595,
           30835864-30836207,30836589-30836758,30837080-30837185,
           30837267-30837330,30838462-30838616
          Length = 925

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 353 QKTYLFDYKQNKASLLIDKKLKQFSCLKKSACYLLNI 463
           Q T  F Y  N++ LLI K +KQ   ++ S C+   I
Sbjct: 269 QLTLQFLYSHNRSDLLILKTIKQAVEMRNSVCHSATI 305


>07_03_0480 + 18567759-18567956,18568140-18569226,18570025-18570380
          Length = 546

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -3

Query: 257 LAACVNSIPGITSIYEWKNEINEDKETLLMIKTRTSQVDK-LTEYVRSN 114
           L+AC +S P +    +  +  ++D E LLM   + +Q+DK L   V+S+
Sbjct: 257 LSACCHSRPSMEGAQQ-HSVASQDDEQLLMFSDQENQIDKTLLTLVKSD 304


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,138,254
Number of Sequences: 37544
Number of extensions: 225336
Number of successful extensions: 412
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1095026320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)