Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_P12
         (578 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    24   4.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   4.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   7.2  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    23   9.5  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   9.5  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 220 VFCIGFSVLNAQYHSTRCVTTH 155
           VFCIGF++ ++      C   H
Sbjct: 140 VFCIGFTIKDSMSQRKTCYAQH 161


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = +1

Query: 244 GNGEPIVHTFNVVHTLVQGNAFHCCSTPRHHTFTLVY 354
           G G+P + T  +++  V  +   C S P    F  ++
Sbjct: 23  GTGKPFLPTSFLIYCFVSPSCLECSSVPLFINFIFMF 59


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = -3

Query: 387 CESSGCESVLTVHERECVMTRCRAAVECISLNQCVNY 277
           C++S C  ++   + E  +     A  C +L +C N+
Sbjct: 82  CDTSACPPLIEFCDAERTIRPKNIAGTCCTLQRCDNF 118


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 390 RCESSGCESVLTVHERECVMTRCRAAVECIS 298
           RC + G +  L  H+R C    C+    C++
Sbjct: 43  RCRNHGLKIGLKGHKRYCKYRACQCEKCCLT 73


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = -3

Query: 390 RCESSGCESVLTVHERECVMTRCRAAVECIS 298
           RC + G +  L  H+R C    C+    C++
Sbjct: 43  RCRNHGLKIGLKGHKRYCKYRACQCEKCCLT 73


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 427,678
Number of Sequences: 2352
Number of extensions: 8397
Number of successful extensions: 55
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)