Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_P10
(873 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41996-4|AAA83473.1| 238|Caenorhabditis elegans Hypothetical pr... 149 3e-36
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p... 31 1.4
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 31 1.4
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 31 1.4
U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein. 31 1.4
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 31 1.4
U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical pr... 29 3.3
U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical pr... 29 3.3
U29097-8|AAA68415.1| 341|Caenorhabditis elegans Serpentine rece... 29 3.3
AF016415-6|AAB65267.1| 283|Caenorhabditis elegans Lysozyme prot... 29 3.3
>U41996-4|AAA83473.1| 238|Caenorhabditis elegans Hypothetical
protein F38E1.9 protein.
Length = 238
Score = 149 bits (360), Expect = 3e-36
Identities = 78/231 (33%), Positives = 119/231 (51%)
Frame = -1
Query: 786 MAEILKGLLLGVLSQKCYNEYFXKYNFLDVPCFKSTXXXXXXXXXXXXXXXXXVPQIFKI 607
M +I++ L G C+ E +NF C K+ VPQI KI
Sbjct: 1 MNDIIQSLFPG----NCFEELLINFNFFHPTCPKAVLSRGLGFAITLGSILLFVPQILKI 56
Query: 606 LQSKSAEGINIYGVYLELFAITANFAYSYVMGFPFSAWGEGTFLAIQTAMIAALVLHYGG 427
++SA+GI+ L L +YSY GF FS WG+ F+A+Q +I + + G
Sbjct: 57 QAARSAQGISAASQLLALVGAIGTASYSYRSGFVFSGWGDSFFVAVQLVIIILQIFLFSG 116
Query: 426 APMKGGIFLSVYCAIVSVLVSGYTSTDILWTMQAVTVPIILIAKSIQIGTNYKNGSTGQL 247
M FL + A+ +VS L +Q +PI++++K +QI NY+ STGQL
Sbjct: 117 QTMLSVGFLGIVSAVAYGVVSKSIPMQTLTAVQTAGIPIVVVSKLLQISQNYRAQSTGQL 176
Query: 246 SFITCFLLFGGSVARIFTSIQETGDSIIXLTYCVSTIANGAIVLQMLWYWN 94
S I+ FL F G++AR+FTS+Q+TGD ++ ++Y + + NG I Q YW+
Sbjct: 177 SLISVFLQFAGTLARVFTSVQDTGDMLLIVSYSTAAVLNGLIFAQFFMYWS 227
>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
protein 2, isoform a protein.
Length = 1538
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -1
Query: 495 WGEGTFLAIQTAMIAALVLHYGGAPMKGGIFLSVYCA--IVSVLVSGYTSTDILWT 334
W F+ + ++ ALV +GG + G FL ++ A ++ +L GYT +LWT
Sbjct: 1125 WNRFDFVTVVGSITDALVTEFGGHFVSLG-FLRLFRAARLIRLLQQGYTIRILLWT 1179
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -1
Query: 495 WGEGTFLAIQTAMIAALVLHYGGAPMKGGIFLSVYCA--IVSVLVSGYTSTDILWT 334
W F+ + ++ ALV +GG + G FL ++ A ++ +L GYT +LWT
Sbjct: 1125 WNRFDFVTVVGSITDALVTEFGGHFVSLG-FLRLFRAARLIRLLQQGYTIRILLWT 1179
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -1
Query: 495 WGEGTFLAIQTAMIAALVLHYGGAPMKGGIFLSVYCA--IVSVLVSGYTSTDILWT 334
W F+ + ++ ALV +GG + G FL ++ A ++ +L GYT +LWT
Sbjct: 1244 WNRFDFVTVVGSITDALVTEFGGHFVSLG-FLRLFRAARLIRLLQQGYTIRILLWT 1298
>U25119-1|AAA85728.1| 1053|Caenorhabditis elegans Unc-2 protein.
Length = 1053
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -1
Query: 495 WGEGTFLAIQTAMIAALVLHYGGAPMKGGIFLSVYCA--IVSVLVSGYTSTDILWT 334
W F+ + ++ ALV +GG + G FL ++ A ++ +L GYT +LWT
Sbjct: 731 WNRFDFVTVVGSITDALVTEFGGHFVSLG-FLRLFRAARLIRLLQQGYTIRILLWT 785
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -1
Query: 495 WGEGTFLAIQTAMIAALVLHYGGAPMKGGIFLSVYCA--IVSVLVSGYTSTDILWT 334
W F+ + ++ ALV +GG + G FL ++ A ++ +L GYT +LWT
Sbjct: 1244 WNRFDFVTVVGSITDALVTEFGGHFVSLG-FLRLFRAARLIRLLQQGYTIRILLWT 1298
>U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical
protein F20D12.1b protein.
Length = 867
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 487 RNIFSHPNGNDSSFSTPLWWRSNEGRNISVCL 392
+N+ +HPN DSSF+ + + S++ NI CL
Sbjct: 496 KNLVTHPNYRDSSFTPFVLFISDDVPNIHECL 527
>U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical
protein F20D12.1a protein.
Length = 1030
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -3
Query: 487 RNIFSHPNGNDSSFSTPLWWRSNEGRNISVCL 392
+N+ +HPN DSSF+ + + S++ NI CL
Sbjct: 659 KNLVTHPNYRDSSFTPFVLFISDDVPNIHECL 690
>U29097-8|AAA68415.1| 341|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 28 protein.
Length = 341
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = -3
Query: 421 NEGRNISVCLLCNSLSFSKWLYLH*YIMDHAGCHCSYHSHSQVNPNRNEL 272
+E NI +C+L L F+ +LY+H I + H Y+ +S+ N L
Sbjct: 186 HEVNNIRICVLIVLLFFAIFLYIHNKIREKRMVHNVYNINSRYKSYENYL 235
>AF016415-6|AAB65267.1| 283|Caenorhabditis elegans Lysozyme protein
7 protein.
Length = 283
Score = 29.5 bits (63), Expect = 3.3
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 7/116 (6%)
Frame = -1
Query: 417 KGGIFLSVYCAIVSVL-VSGYTSTDIL---WTMQAVTVPIILIAKSIQIGTNYKNGSTGQ 250
K G+ + +Y V GY D + T +A+TV I I + TN+ N +
Sbjct: 105 KAGLGIEIYMTPQPVSNKQGYQQLDEIIQGLTARAITVRAIWI--QVTSPTNWPNNANSN 162
Query: 249 LSFITCFLLFG---GSVARIFTSIQETGDSIIXLTYCVSTIANGAIVLQMLWYWNV 91
++FI + G I+TS + +T S I N + LWYWNV
Sbjct: 163 INFINSIVSRARQSGLTVGIYTSYYDWNQ----ITTGWSNIGNDVL----LWYWNV 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,126,765
Number of Sequences: 27780
Number of extensions: 443784
Number of successful extensions: 938
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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