Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_P05
         (417 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    24   1.9  
AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...    24   2.5  
AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding pr...    22   7.8  

>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 107 GGRNY*CLSYFTTYSVAIEQLLQIKNN 187
           GG +Y CL   T+YS A    +Q+K+N
Sbjct: 9   GGCSYICLLNPTSYSCACPIGIQLKDN 35


>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 281 AALTENITNANTIIKRSVIKKKKLFILHFCISCF*FVAVVR 159
           AA   +I++A+  +  S +  K    LH+C+SC     VVR
Sbjct: 46  AAAVRDISDAS--VYSSYVLPKLYAKLHYCVSCAIHSKVVR 84


>AY146716-1|AAO12076.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP12 protein.
          Length = 159

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 363 NREKAFLFVKNCGGDWIPTSFS 298
           N EKA+L +  C G+ I  S +
Sbjct: 129 NCEKAYLILNQCQGNTITNSLN 150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,799
Number of Sequences: 2352
Number of extensions: 6559
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)