Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_P03
         (573 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X76538-1|CAA54047.1|  176|Homo sapiens hMpv17 protein.                 33   0.94 
S68430-1|AAD14014.1|  176|Homo sapiens Mpv17 protein.                  33   0.94 
BC016289-1|AAH16289.2|  172|Homo sapiens MPV17 protein protein.        33   0.94 
BC001115-1|AAH01115.1|  176|Homo sapiens MPV17 protein protein.        33   0.94 
AC013413-6|AAY24298.1|  176|Homo sapiens unknown protein.              33   0.94 
BC117321-1|AAI17322.1| 1486|Homo sapiens RAPGEF2 protein protein.      32   1.2  
AC074344-1|AAY40909.1| 1479|Homo sapiens unknown protein.              32   1.2  
AB002311-1|BAA20772.2| 1508|Homo sapiens KIAA0313 protein.             32   1.2  
BC041337-1|AAH41337.1|  611|Homo sapiens Rho-related BTB domain ...    29   8.8  
AB020685-1|BAA74901.2|  687|Homo sapiens KIAA0878 protein protein.     29   8.8  

>X76538-1|CAA54047.1|  176|Homo sapiens hMpv17 protein.
          Length = 176

 Score = 32.7 bits (71), Expect = 0.94
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 374 IDAAKK-LGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEK 249
           +DA KK L D  G   CF+GCF+   G +N     D  A +++
Sbjct: 83  VDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQR 125


>S68430-1|AAD14014.1|  176|Homo sapiens Mpv17 protein.
          Length = 176

 Score = 32.7 bits (71), Expect = 0.94
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 374 IDAAKK-LGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEK 249
           +DA KK L D  G   CF+GCF+   G +N     D  A +++
Sbjct: 83  VDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQR 125


>BC016289-1|AAH16289.2|  172|Homo sapiens MPV17 protein protein.
          Length = 172

 Score = 32.7 bits (71), Expect = 0.94
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 374 IDAAKK-LGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEK 249
           +DA KK L D  G   CF+GCF+   G +N     D  A +++
Sbjct: 79  VDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQR 121


>BC001115-1|AAH01115.1|  176|Homo sapiens MPV17 protein protein.
          Length = 176

 Score = 32.7 bits (71), Expect = 0.94
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 374 IDAAKK-LGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEK 249
           +DA KK L D  G   CF+GCF+   G +N     D  A +++
Sbjct: 83  VDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQR 125


>AC013413-6|AAY24298.1|  176|Homo sapiens unknown protein.
          Length = 176

 Score = 32.7 bits (71), Expect = 0.94
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -2

Query: 374 IDAAKK-LGDPSGLNSCFVGCFMKKAGIINASGLFDVAATIEK 249
           +DA KK L D  G   CF+GCF+   G +N     D  A +++
Sbjct: 83  VDALKKMLLDQGGFAPCFLGCFLPLVGALNGLSAQDNWAKLQR 125


>BC117321-1|AAI17322.1| 1486|Homo sapiens RAPGEF2 protein protein.
          Length = 1486

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
 Frame = -2

Query: 311  MKKAGIINASGLFDVAATIEKSKKYLTS---EEDLKAFEKLTEMCAP-ENDKPVSDSXQG 144
            ++++  +NA  L++ A    K K+YL++   E D ++ + L+  C P  N  P +   + 
Sbjct: 944  VRRSSFLNAKKLYEDAQMARKVKQYLSNLELEMDEESLQTLSLQCEPATNTLPKNPGDKK 1003

Query: 143  LRKSKTSP 120
              KS+TSP
Sbjct: 1004 PVKSETSP 1011


>AC074344-1|AAY40909.1| 1479|Homo sapiens unknown protein.
          Length = 1479

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
 Frame = -2

Query: 311  MKKAGIINASGLFDVAATIEKSKKYLTS---EEDLKAFEKLTEMCAP-ENDKPVSDSXQG 144
            ++++  +NA  L++ A    K K+YL++   E D ++ + L+  C P  N  P +   + 
Sbjct: 936  VRRSSFLNAKKLYEDAQMARKVKQYLSNLELEMDEESLQTLSLQCEPATNTLPKNPGDKK 995

Query: 143  LRKSKTSP 120
              KS+TSP
Sbjct: 996  PVKSETSP 1003


>AB002311-1|BAA20772.2| 1508|Homo sapiens KIAA0313 protein.
          Length = 1508

 Score = 32.3 bits (70), Expect = 1.2
 Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
 Frame = -2

Query: 311  MKKAGIINASGLFDVAATIEKSKKYLTS---EEDLKAFEKLTEMCAP-ENDKPVSDSXQG 144
            ++++  +NA  L++ A    K K+YL++   E D ++ + L+  C P  N  P +   + 
Sbjct: 965  VRRSSFLNAKKLYEDAQMARKVKQYLSNLELEMDEESLQTLSLQCEPATNTLPKNPGDKK 1024

Query: 143  LRKSKTSP 120
              KS+TSP
Sbjct: 1025 PVKSETSP 1032


>BC041337-1|AAH41337.1|  611|Homo sapiens Rho-related BTB domain
           containing 3 protein.
          Length = 611

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +3

Query: 78  EKTEKLPLFATKQSRRSFALSQPLXTVTDWFVVFWSAHLR*FLEGFQVLL--AGKIFLAL 251
           E+ EK+P+   + S  +  L+  L       VVF++  L+  +E  +++L     +F+ L
Sbjct: 225 EQPEKMPVLKAEASHYNSDLNNLLFCCQCVDVVFYNPDLKKVVEAHKIVLCAVSHVFMLL 284

Query: 252 LNSSGYIEKTTCVDDSSFLHET 317
            N    ++  T + DSS +  T
Sbjct: 285 FN----VKSPTDIQDSSIIRTT 302


>AB020685-1|BAA74901.2|  687|Homo sapiens KIAA0878 protein protein.
          Length = 687

 Score = 29.5 bits (63), Expect = 8.8
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +3

Query: 78  EKTEKLPLFATKQSRRSFALSQPLXTVTDWFVVFWSAHLR*FLEGFQVLL--AGKIFLAL 251
           E+ EK+P+   + S  +  L+  L       VVF++  L+  +E  +++L     +F+ L
Sbjct: 301 EQPEKMPVLKAEASHYNSDLNNLLFCCQCVDVVFYNPDLKKVVEAHKIVLCAVSHVFMLL 360

Query: 252 LNSSGYIEKTTCVDDSSFLHET 317
            N    ++  T + DSS +  T
Sbjct: 361 FN----VKSPTDIQDSSIIRTT 378


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,572,211
Number of Sequences: 237096
Number of extensions: 1301708
Number of successful extensions: 2541
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2541
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)