Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_P03
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              39   3e-05
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               27   0.13 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   3.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   3.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   6.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   6.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.6  

>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 39.1 bits (87), Expect = 3e-05
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
 Frame = -2

Query: 503 VLAFCALAVGVNALTEEQKAEITKSSLPLIAECSKEFSVNQGDIDAAKK-LGDPSGLN-S 330
           + AFC   VG+ A++EE   ++ K    + + C++E  ++    D  KK + D +    +
Sbjct: 7   IFAFCL--VGILAVSEESINKLRK----IESVCAEENGIDLKKADDVKKGIFDKNDEKLA 60

Query: 329 CFVGCFMKKAGIINASGLFDVAATIEKSKKYLTSEE 222
           C+V C +KK G +NA   F+     E++ K L SE+
Sbjct: 61  CYVDCMLKKVGFVNADTTFNEEKFRERTTK-LDSEQ 95



 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 166 QSVTVXKGCERAKLLLDCFVAN 101
           + +T    C+++  LL CF+ N
Sbjct: 104 KDITESNSCKKSSKLLQCFIDN 125



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 230 SEEDLKAFEKLTEMCAPEN 174
           SEE +    K+  +CA EN
Sbjct: 19  SEESINKLRKIESVCAEEN 37


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
 Frame = -2

Query: 410 ECSKEFSVNQGDIDAAKKLGDPSGLNS---CFVGCFMKKAGIINASGLFDVAATIEKSKK 240
           +C KE  V+   +   K  GD    +    C++ CFM K GI++ +   DV   +    +
Sbjct: 28  DCRKESKVSWAALKKMKA-GDMEQDDQNLKCYLKCFMTKHGILDKNAEVDVQKALRHLPR 86

Query: 239 YLTSEEDLKAFEKLTEMCAPENDKPVSDSXQ 147
            +  +   K F K   +   +N+ P   + Q
Sbjct: 87  SM-QDSTKKLFNKCKSI---QNEDPCEKAYQ 113


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 301 LESSTQVVFSM*PLLLRRARNILP 230
           L+S+ +VV  +  + L  A+NILP
Sbjct: 32  LDSNVEVVVGVPSIYLTYAKNILP 55


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 83  DRETSFVCNETVEEKFCSFAAL 148
           D+ T F     VEE  C F+A+
Sbjct: 452 DKSTEFFLATVVEEAACRFSAV 473


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 471 YTNSQCTECQYNKRIS*HFDVLYLLVLNRDSNS 569
           YTN   T   Y+      F+  ++  ++RDSNS
Sbjct: 288 YTNLSMTMKYYDYGADFPFNFAFIKNVSRDSNS 320


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 471 YTNSQCTECQYNKRIS*HFDVLYLLVLNRDSNS 569
           YTN   T   Y+      F+  ++  ++RDSNS
Sbjct: 288 YTNLSMTMKYYDYGADFPFNFAFIKNVSRDSNS 320


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +3

Query: 165 WFVVFWSAHLR 197
           WFV FW  H +
Sbjct: 425 WFVEFWEHHFQ 435


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,796
Number of Sequences: 438
Number of extensions: 2801
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)