Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P02_pT_O19
         (707 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF382010-11|AAL54771.1|  603|Homo sapiens NADH dehydrogenase sub...    30   7.1  
AJ010444-1|CAA09183.1|  210|Homo sapiens immunoglobulin kappa li...    30   9.3  

>AF382010-11|AAL54771.1|  603|Homo sapiens NADH dehydrogenase
           subunit 5 protein.
          Length = 603

 Score = 30.3 bits (65), Expect = 7.1
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -3

Query: 672 IRLTIGNLNEFGRPMISXLYSLDHQIQT 589
           I LTIG+L   G P ++  YS DH I+T
Sbjct: 371 ISLTIGSLALAGMPFLTGFYSKDHIIET 398


>AJ010444-1|CAA09183.1|  210|Homo sapiens immunoglobulin kappa light
           chain protein.
          Length = 210

 Score = 29.9 bits (64), Expect = 9.3
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
 Frame = -1

Query: 551 RSPSPSQAWWLLWPTALSC-LELVRCPSTAPVWSTDRXXXXXXXXXXXXXLPVWFLQSPP 375
           R P+      LLW     C +++ + PST      DR                WF Q  P
Sbjct: 4   RVPAQLLGLLLLWLPGAKCDIQMTQSPSTLSASVGDRVTITCRASQSVSRWLAWF-QQKP 62

Query: 374 SLKPRILLLSSWMLLTVSPS 315
              P++L+  +  L T  PS
Sbjct: 63  GKAPKLLIYEASTLETGVPS 82


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,898,565
Number of Sequences: 237096
Number of extensions: 1646338
Number of successful extensions: 11690
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11690
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)